KEGG   Pectobacterium versatile: OA04_09480
Entry
OA04_09480        CDS       T07772                                 
Symbol
fimD
Name
(GenBank) fimbrial biogenesis outer membrane usher protein
  KO
K12518  outer membrane usher protein PapC
Organism
pvz  Pectobacterium versatile
Brite
KEGG Orthology (KO) [BR:pvz00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pvz02044]
    OA04_09480 (fimD)
Secretion system [BR:pvz02044]
 Chaperone-usher system
  P pilus assembly protein
   OA04_09480 (fimD)
SSDB
Motif
Pfam: Usher PapC_N PapC_C Big_6 CUB_2
Other DBs
NCBI-ProteinID: AVT57576
LinkDB
Position
complement(1026679..1029177)
AA seq 832 aa
MAMKNITFKEKIKSALFRGSIFIFSLNTTSLSATEFNVNVLDVDDRSEIDLSHFSDPEYV
TPGAYLLSLKVNSREIQQLIVNYLPEGNNRSRPMACLPPELVDKLALKQEARDKIELWNN
GACVDLTPIAGVNVSNQIGMGALNITIPQAWLMYSDRNWIPPEQWDHGIGGALLDYNLVG
NVRRDTNGKGTSHYLSSYGTAGFNQGAWRYRADYRYFLQKSRNSNRDRFSWDQFYAYRPL
PTLSADLKLGEMYFSSNLFDSYRFTGISLANNENMLPPSLRGYAPEIRGVAKSNATVTVT
QNGRLIYETTVPAGPFAIQDMKNGVSGTLDVRVTEEDGTVTTFQTESANLPYLTRPGHVQ
YKLAAGKPSNTNHRLQGPAFSAAEASWGLSNAWSVYGGTILSDGYQSWSAGIGKNLYLLG
ALSADVTQSRATLPAPYSSQMGHAFSLNWSKYFNSIDSQISFAGYRFSEKTYMSMAQYLY
ALNLDSRYRNEKERYTITLSKNFAMQESSSVLSGLSTYVTYTRQTYWNETQQDRYGISLN
KYLDIGAFKGISANLSAYRTEFNRRTDDSLYLSFSIPLGEKDRLSYSMGRYNDGSNQALT
YSNNADPRRTWNLSTRHDSKEKTYLSGNYTHLAPMTDATVGVAWQQDRYTYLNGSLRGGI
TATRHGVAAHPKGNQGGTRIMVDTEQAGVPFSGSQVETNRYGLAVIAGTSSYYDVSTRID
VQKLPSDIEAVTTVVQGTLTEGAIGYRKFDVVSGAKIMANVALADGKNPPFAAQIKNKKG
RDIAMITNGGQAYITGVSPDETLSVIWEGRTQCVITLPPTLNHLDALLLPCK
NT seq 2499 nt   +upstreamnt  +downstreamnt
atggcaatgaagaatattacgttcaaagaaaaaataaaatctgcgttatttcgcggcagt
atttttattttttctttgaatacgacatcgctcagtgcaacggaatttaacgttaacgta
ctggatgtcgacgatcgtagtgaaattgatcttagccatttttccgatcccgaatacgtc
acgcccggcgcttatcttttatccctaaaggtgaactcgcgtgaaatacagcaactgatc
gttaactatctgccggaaggcaataatcgctcccgcccaatggcctgccttccgcctgaa
ctcgtcgataaactggcgctaaaacaagaagcacgcgacaaaatcgaattatggaataac
ggcgcgtgcgtcgatctgacccccattgctggcgttaacgtctctaaccagataggcatg
ggagcgctgaatattacgattcctcaggcatggctgatgtatagcgatcgcaactggatt
ccgcccgagcaatgggatcatggtatcggcggtgcgctactggactacaacctcgtcggg
aacgtacgccgtgataccaacggtaaaggcacatcacactatctcagcagctacggcacg
gccggattcaatcagggtgcctggcgttaccgtgccgattaccgctattttctgcaaaaa
tcgcgcaactcgaatcgcgatcgtttctcgtgggatcagttttacgcctatcgtccgctg
ccaacgctttcagccgatctcaagctgggggaaatgtatttcagcagcaacctgttcgat
agctatcgctttaccggcatctcattagccaataacgagaacatgcttcccccttcgctg
cgtggctacgcgcccgaaattcgcggcgtcgccaaatcaaacgcgacggtgaccgtcacg
caaaatggcaggctgatttatgaaaccaccgtgcctgccggtccctttgcgattcaggat
atgaaaaacggcgtcagcggaacgctggatgtccgcgtgacggaagaagacggtacggtg
acgacgttccagaccgaatcggccaacctgccttacctgactcggccgggacacgtgcag
tataaactcgccgccggtaagccctcgaataccaaccatcgtctgcaaggcccggccttt
tctgccgccgaagcctcatggggattatccaacgcgtggtcggtgtacggcggcactatt
ttgtccgatggctatcagtcctggtctgcgggcatcgggaaaaacctctacctgctgggc
gcgctgtccgctgacgtcacgcagtcacgcgccacgctcccggcaccgtactcgtcgcaa
atggggcatgctttctcgctcaactggtctaaatacttcaactcgatcgatagccaaatc
agttttgcgggctaccgcttttcagagaagacctacatgagcatggcgcagtatctctat
gcgctgaatcttgatagccgctatcgcaatgaaaaagagcgctacaccattacgctgtca
aaaaacttcgcgatgcaggaatcatcctccgtgctgagtgggctatcgacctacgtcacc
tatacgcgccaaacctattggaatgaaacgcaacaggatcgctacgggatttcactcaac
aagtaccttgatatcggtgcatttaaaggtatttccgcgaatttatcggcctaccgcacc
gaattcaaccgccgtaccgatgacagcctgtacctgagcttttctattccactcggagag
aaagatcgcctgagctacagcatggggcgctacaacgacggcagcaatcaggcgctgacc
tattccaataacgccgatccgcgtcggacctggaacctgagcacccggcacgacagcaaa
gagaagacttacctgagcggcaactatacccatctggcccccatgacggatgccaccgta
ggcgttgcctggcagcaggatcgctacacctacctgaacggctcactgcgcggcgggatt
accgcaacccgccacggcgtcgcagcacacccgaaaggcaatcagggcggcacccgtatc
atggtagacaccgagcaagcaggcgtgccgttctctggcagccaggttgagactaaccgc
tatggtctggccgtgattgctggcaccagtagctactacgatgtgtcgactcgcattgat
gtacagaaattaccgtcagacattgaagcagtgacgacagtcgttcagggcacgctgacc
gaaggcgcaatcggctaccgcaaattcgacgtggtgagcggggcaaaaatcatggcgaac
gttgcactggccgatggcaaaaatcccccgttcgccgctcagatcaaaaacaagaaaggt
cgcgatatcgccatgatcaccaacggcgggcaggcctacatcaccggcgtgtcgcctgac
gaaacgctgtccgtcatctgggaagggagaacacagtgtgtcatcaccctgcccccgacc
ttaaatcaccttgatgcactgctgcttccctgtaaataa

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