Pectobacterium versatile: OA04_10450
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Entry
OA04_10450 CDS
T07772
Symbol
recC
Name
(GenBank) exonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pvz
Pectobacterium versatile
Pathway
pvz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OA04_10450 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvz03400
]
OA04_10450 (recC)
Enzymes [BR:
pvz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OA04_10450 (recC)
DNA repair and recombination proteins [BR:
pvz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OA04_10450 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AVT57669
LinkDB
All DBs
Position
1121454..1124852
Genome browser
AA seq
1132 aa
AA seq
DB search
MFRIYHSNQLDILKRLMVELIKRQPLADPFQQEVILVQSPGMAQWLQIELAGHFGIAANI
QFPLPGVFLWNMCRHVLPDIPKESAFSKDAMTWKLMHLLPDLLAQPDFVALNHYLQDDDN
QRKLHQLAGRVADLFDQYLIYRPEWIKAWQEGKQVDDLGGNQLWQSALWRALVDYTRELA
QPEWHHAILYQRFITALEQAKACPKGLPPRVFICGISALPPIYLQALNALAQHIDVHLLF
TNPCRHYWSDIQDYKFLAKLKARHRRLHRFDGEQPDETRPLFRDPSQAETLFNDDGKQSI
NNPLLASWGKLGRDNLYLLAELDSVQEIDAFVESDGDNLLQTLQRDILELEDHAVVAVSH
ETQNTSMQKRLLALDDRSIDFHACHSPQREVEVLHDRLLAMMADDPELMPRDVIVMMADI
DSYTPFIQAVFGNAPDNRYLPFAISDQRARHAHPALQAVISLLDLPTSRFTAEQVLALLE
VPALAARFGIQEEGLRRLRLWVVESGVRWGLDDDNVRDLMLPPTGQHTWRFGLTRMLLGY
AMDSQVGDWQGVLPYDESSGLIAELAGQLAELLMQIHHWRQRLSQPRVLVDWLPLCRELI
ETFFDADSETEAALALVEKQWQYVIGMGTVAHYPQQVPISRLRDELSRRLDQERLSQRFL
AGSINFCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMGRKIKRGDRSRRDDDRYL
FLEALLSAQHKLYISYIGRSIQDNTRRYPSVLVSELTEYIAQSYVLPGDEALDIDSSAER
VVKHLCREHSRMPFDANNFLSAPQPLSFAAEWLAAANQKGEAQPDFDREALSERASDRDV
SLDDLKRFYRHPVRAFFQLRLGVSFMLHSDELLDEEPFVVDSLNRYQLNSELLNTLINEG
DTEKLYRRARAAGELPYGAFGEIYWQEQQQEMAQLAARVRDELTPSLSVSREVDILLDGV
RVRGWLNQVQPDGLLRWRPGTLSMKDGITLWLEHLAYCATGGQGESRLYGREDTAWRFAA
LSEAQAREHLAVMLDGYRQGMSKPLLLLNKAGSAWLAECYDRESDSLRADEDAQNKARTR
LLQAWQGNMGMRGEGEDYYLQRIIRELDEKRMNEVIEAAQIWLLPPFRFNLA
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaatctatcactccaatcagttggatatcttgaaaagactgatggttgagctg
ataaaacgtcagccgcttgcagatcccttccagcaggaagtgattttggtgcaaagcccg
gggatggcgcagtggctgcaaattgaactggctgggcacttcggcattgctgccaatatt
caattcccgctgcccggtgtttttttgtggaatatgtgtcgccatgtgctgccggatatt
ccaaaagaaagcgctttcagcaaggatgcgatgacgtggaagctcatgcatttgctgccc
gatttgttggcacagcctgattttgtggcccttaaccactatttgcaggatgacgataat
cagcgcaagctgcatcagcttgccggacgcgtagcggatcttttcgatcaatatctgatt
tatcgtcccgagtggatcaaggcatggcaagaagggaaacaggttgacgatctcggtggc
aaccagctgtggcaatcggcgctgtggcgtgcgttggttgactacactcgcgaactggcg
cagcccgaatggcaccatgcgattttgtatcaacgctttattactgcgctagaacaggca
aaagcgtgtccgaaaggcctgccgccacgcgtttttatctgcggtatttcggcgttaccc
cctatctatttacaggcgttgaacgcgctggcgcagcatattgacgtgcatctgctattt
accaatccctgccgccattactggagtgacattcaggactataaatttctggcgaagcta
aaagcccgccaccgtcgcctacatcgctttgacggtgaacagcctgatgaaacccgtccg
ctctttcgcgatccctcacaggcagaaacgttgttcaacgacgacggtaaacagtcgatt
aataaccccttgctggcatcgtggggcaagctggggcgcgataacctttatctgctggct
gagttggatagcgtgcaggaaatcgatgcctttgttgagtcggatggcgataacctgctg
caaaccttgcagcgcgacattcttgagctggaagaccacgcggtggtggccgtcagccac
gaaacgcagaacaccagcatgcaaaaacgcctgctggctctcgacgatcgttcgattgat
tttcacgcctgccatagcccgcagcgtgaggttgaagtgcttcacgatcggttgctggct
atgatggctgacgatcctgagctgatgccgcgcgacgtcattgtgatgatggcggatatc
gacagctatacgccgtttattcaggcggtatttggtaacgcaccggacaaccgttatctg
ccttttgccatctccgatcagcgtgcgcgacatgcgcatcccgcattgcaggcggtaatc
agcctgctggatttaccgacgagccgttttacggcagaacaggttctggcattgcttgaa
gtacccgcgctggctgcgcgcttcggtattcaggaagaagggctacggcgccttcgcctg
tgggtcgtggaatcaggcgtgcgctggggattggatgacgacaacgtgcgcgatctgatg
ctgccgccaacggggcagcatacgtggcgtttcggtctcacgagaatgctgctgggctat
gcgatggacagccaggtcggtgactggcagggcgtactgccttacgatgaatccagcggc
ctgattgccgaactggctggtcaactggccgaactcctgatgcagatccaccactggcgt
cagcgtctgtctcagccacgtgtgcttgttgactggttaccgctgtgtcgagagctgatc
gaaaccttctttgatgctgacagcgagaccgaagcggcgctggccttggtggaaaaacag
tggcagtacgtgattggtatgggcacggtggcgcattatccgcaacaggtgccgatctct
cggttacgtgatgaactgtcgcgacgtctcgatcaggagcgactcagccagcgttttcta
gccggttcgatcaatttttgtacgctgatgcccatgcgttccatcccgttcaaggttgtg
tgtttattgggtatgaatgacggcgtctatccccgaacgctgccgccactcgggttcgat
ctgatggggcggaaaattaagcgtggcgatcgtagccgacgtgatgatgaccgctatctg
tttcttgaggcgctcctgtcggcgcagcacaaactctatatcagctatatcgggcgctcg
atccaggataatacgcgtcgctatccttccgtattggtcagcgaactgacggaatatatt
gcacaaagttacgtcctgccgggtgatgaagcgctggatatcgatagcagcgcggagcgc
gtggtgaagcacctttgccgcgaacatagccggatgccttttgatgcgaataacttcctg
tctgcaccgcagccgttgagctttgcggcagagtggctggcggcggcgaaccaaaaaggg
gaagctcaacctgatttcgatcgtgaagccttgtccgaaagagcgagtgatagggatgtg
agtctggacgatctaaagcgtttttatcgtcatcctgtgcgagccttttttcaactgcgg
cttggcgtgagttttatgctgcacagcgatgagctgttggatgaagagccctttgtggtt
gatagccttaaccgctatcagttgaatagcgagttgcttaataccttgattaatgaaggc
gatacggaaaaactgtatcgccgtgccagagccgcgggtgaactgccctatggcgcgttc
ggcgaaatttactggcaggaacagcagcaggagatggcgcagttggctgcgcgtgtacgc
gatgaattaacgccttcgctgtcggtgagtcgggaagtggatatcctccttgacggcgtg
cgcgtcaggggttggctgaatcaggttcagccggatggtttgctgcgctggcgtccgggc
acactttctatgaaggatggcattacgctgtggttggaacatcttgcctactgcgcaacg
ggcggacagggtgaaagccgactgtatgggcgggaagacacggcgtggcgctttgctgcc
ttgtcggaagcgcaggccagagaacatctggctgtcatgctggatggatatcgtcaggga
atgagcaagccgctgttattgctaaataaagcagggagcgcctggctggctgaatgttat
gatcgtgaaagcgatagcctgcgggcggatgaggacgcgcagaacaaagcgcggacccgg
ttactgcaagcctggcagggcaacatgggaatgcggggtgaaggtgaggattattacctg
caacgcattattcgtgagttggatgaaaagcgaatgaatgaggtgattgaagcggcgcaa
atctggctactgccaccgttccgctttaatctggcttga
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