Pectobacterium versatile: OA04_10470
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Entry
OA04_10470 CDS
T07772
Symbol
recB
Name
(GenBank) exonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pvz
Pectobacterium versatile
Pathway
pvz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OA04_10470 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvz03400
]
OA04_10470 (recB)
Enzymes [BR:
pvz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OA04_10470 (recB)
DNA repair and recombination proteins [BR:
pvz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OA04_10470 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
AVT57671
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All DBs
Position
1127882..1131463
Genome browser
AA seq
1193 aa
AA seq
DB search
MKNAAPQSLDVMTLPLLGERLIEASAGTGKTYTLAALYLRLLLGLGKQAAYPRPLLVEEI
LVVTFTEAATEELRERIRARIHALRIACLRKSAQGEEAEKPKDASLAQLLAEISDHRDAA
DVLLAAERQMDEAAIYTIHGFCQRMLTTNAFESGVLFEQVLIEDEQPLRRQACADFWRRY
CYPLPVEVARIIGLEWKGPENLLADLAPYLHGEPPAFRLPPQEDETLLSRHEKIVATIDA
YKQRWLASAVDLESLIVASGVDKRSYSSKHLPNWLQKVTLWAEQPTLDYQLPKDLVRFAQ
QTLIEKTKKGEPPVHALFEETERLLEAPLSLRDLVIVRALSAIRDSVREEKRQRAELGFD
DLLSRLDVALQQPGGEQLASAIRERYPVAMIDEFQDTDPQQYRIFRTLYVGQSQCGLLLI
GDPKQAIYAFRGADIFTYMHARGEVAAHYTLGTNWRSSHQMVRGVNRLFERLENPFIFQN
IPFLPVKPAESKRGLVFEVAGQPQPALQFWLTGSEPIGIGDYQQRMARQCAAQIRDWLAA
SQRSEAWLITDDSRRLVRASDMSVLVRSRREASLIRDALSRLSIPSVYLSNRDSVFSTPE
ASDMLWLLQAVLAPEQERTLRSAMATALMGLDAEQVDALGQSEAAWDALVDEFAGYRVLW
RQRGVLPMLRALMSQHQLAENLLASAEGERRITDILHIGELLQDASATLDSEHALVRWLS
QQIVQPNPQAENQQLRLESDRHLVQIVTIHKSKGLEYPLVWLPFISNFRVQDQGVYHDRE
SYQAVLDLQNNEESQTLAEEERLAEDLRLLYVALTRSIYHCSVGVAPVQRSRKKDGSSDM
HQSALGYLLQRGKEAEAATLVSELEGMVGDGVALTPLQATEEQRWQPDRPELAELRARHI
ERQLRDGWRVTSYSGLQQHGSASAQDLVPRLDIEAIGERQEADETQLTPHTFPRGASPGT
FLHSLFETLDFTQPVEDDWLAEQLQLQEFEAHWHPVLKTWMDTLLHTSLNGQGIMLSALD
NADKQAELQFYIPIDAPIQAAQLDRLAKHHDPLSARCPALSFQQVKGMLKGFIDLVFRWE
GRYYLLDYKSNWLGPDASAYTQTAMMQSMAEHRYDLQYQLYTLALHRYLRHRIADYDYER
HFGGVFYLFLRGVEASHPGNGIFACRPSTEFVFGLDALFKGKTPDDADTGIPS
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgccgcgccgcaatcattagacgttatgacgttgccgctcctcggagagcgg
ctgattgaggcgtcggccggaacggggaaaacctatacgctggctgcgctttacctgcgc
ctgctgctggggctgggcaagcaagccgcgtatccacgtccgttgctggtcgaggaaatt
ctggttgtgacctttacggaggccgcgaccgaagagctgcgggagcgtattcgtgccaga
atccacgctttgcgcatcgcctgcctgcgtaaaagcgcgcagggtgaagaagcagagaag
cctaaggatgcttcgctagcgcaactgctggcggagatttcggaccaccgcgatgcggcc
gacgtattgctggcggctgaacgccaaatggacgaagcggcgatctacacgatccacggc
ttctgccagcgtatgctcactaccaatgcgtttgaatccggcgtgcttttcgaacaggtg
ctgatagaagatgaacagccgctgcgccgtcaggcctgcgctgatttctggcgtcgttat
tgctacccgctgccagtcgaggtcgcacgcattatcggtctggagtggaaagggccggaa
aacctgctggccgatctggcgccttatctgcacggtgaaccccctgcgtttcgcttgccg
ccacaagaagatgaaacgctactgagtcgacatgagaagatcgtagcgacgatcgatgca
tacaaacaacgctggctggcgtcagccgtggatctggaatcgctgatcgtggcttctggc
gttgataaacgcagctacagtagtaagcatcttcccaactggctacagaaagttacgctg
tgggcagagcagccgacgctggattatcaactgccgaaagatctggtgagatttgcccag
caaacgctaatcgagaaaacgaagaaaggcgagccgcctgttcatgccctctttgaggag
accgaacggctacttgaagcgccgctgtcgctgcgtgatttagtcattgtccgtgcgctg
tcggcgatccgggattcagtgcgtgaggaaaaacgacagcgtgcagaactgggatttgac
gatctgctgagccgtctggatgttgcgttgcagcagccgggtggggaacagcttgccagc
gccattcgcgaacgctatccggtggcgatgatcgatgagtttcaggataccgacccccaa
cagtaccgtattttccgaacgctgtacgtcgggcagtcgcagtgtgggctgctgctgatc
ggtgaccctaagcaggctatttatgcgtttcgcggtgcggatatttttacctatatgcac
gcacgcggagaagtggccgcacactatacgctgggcacgaactggcgctcgtcgcaccag
atggtacgcggcgttaaccgcttgtttgaacgtctggagaatccttttattttccaaaat
atcccttttctgccagtcaagccggctgaatctaagcgcggtttggtgtttgaggttgcg
ggacagccgcagcctgcgctgcaattctggctaacgggttcggaaccgattggcatagga
gattatcagcagcggatggcgcgccagtgtgcggcgcagattcgtgattggctggcggcc
agccagcgtagcgaagcttggctgatcaccgacgattctcgccgtttggtcagggcatct
gacatgagcgtgctggtgcgtagccgacgtgaagcctcgctgattcgtgatgcgctgagc
cgtttatccattccctcggtgtatctatccaatcgagacagcgtattcagtacgccggaa
gccagcgatatgttgtggctgttgcaggcggtgctggcacccgagcaagagcgcacgtta
cgcagtgccatggcgacggccttgatgggactggatgccgaacaggttgatgcattaggg
caaagcgaagccgcatgggatgcgctggtggatgaatttgcgggctaccgtgttttgtgg
cgccagcgtggcgtgctgccgatgctgcgggcgttgatgagtcaacatcaactggcggag
aacctgctggcgagtgctgagggcgaacgccggattaccgatattctgcatatcggtgaa
ttgttgcaggatgcctccgcaacgcttgatagcgaacatgcgctggtgcgctggctatca
cagcagattgtccaacctaatccgcaggcagagaatcagcagctacgtctggaaagcgat
cgtcacttggtgcagatcgtgacgatccacaaatcgaaagggctggaatacccgctggtg
tggctgcctttcatcagtaacttccgcgtgcaggatcagggcgtttatcacgatcgcgag
agctatcaggccgtgttggatctgcaaaataatgaagaaagccagacgctggcggaagaa
gagcggctggcggaagatttacgtttgctgtatgtcgcgctaacccgttctatctatcac
tgtagcgtgggcgtcgcccccgttcagcggtcacgtaagaaagacggcagcagcgatatg
caccagagcgcgctgggctatttactccaacgtggcaaagaagccgaggcagccacgtta
gtcagcgagctggaaggcatggttggcgacggtgtcgcattaacaccgctacaggcaacg
gaagaacagcgctggcagccagatagaccagaattggcagagctgcgggctcgtcacatt
gaacgccaactgcgcgacggctggcgagtcaccagctattcggggcttcagcaacatggt
tctgcaagcgcacaggatctggtgccgcgtctggatattgaagcgataggtgagcgtcaa
gaagcggatgaaacccaactgacaccgcatacgtttccacgtggcgcgagtccgggaacg
tttttgcatagcctgtttgaaacgctggatttcactcagcccgttgaggatgactggctg
gccgagcagttgcagctacaggaatttgaagcgcactggcatccggtattgaagacgtgg
atggatacgctgttgcatacgtcgcttaacgggcaagggattatgctgtcagcgctggat
aacgccgataagcaggccgaattacagttctatataccgattgatgcgccaatacaggcg
gcgcagctcgatcggttggcaaagcatcacgatccgctatctgcgcggtgtccggcgctc
tcttttcagcaggttaaaggcatgctgaaagggtttatcgatctggtgttccgctgggaa
gggcgctattacctgctggactataagtccaactggctcggccctgatgccagcgcgtac
acccaaacggccatgatgcagtcgatggccgaacaccgctacgacctgcaatatcagctc
tacacgttggctttgcaccgctatctgcgtcatcgcattgcggattatgactatgagcgc
cattttggcggggtgttttatctgtttttacgcggcgttgaagcgtcgcatcccggcaat
ggcatctttgcttgtcgtccctctactgaatttgtttttgggctggatgcgctttttaag
ggaaagacgcctgacgatgctgatacaggaattccctcatga
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integrated database retrieval system
