Pectobacterium versatile: OA04_11540
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Entry
OA04_11540 CDS
T07772
Symbol
sbcD
Name
(GenBank) exonuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pvz
Pectobacterium versatile
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvz03400
]
OA04_11540 (sbcD)
DNA repair and recombination proteins [BR:
pvz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OA04_11540 (sbcD)
Archaeal homologous recombinant proteins
OA04_11540 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AVT57771
LinkDB
All DBs
Position
complement(1261270..1262496)
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AA seq
408 aa
AA seq
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MRIIHTADWHLGQYFYTKSRAAEHQAFLHWLIAQVEQHQVDAIIVAGDIFDNGSPPSYAR
EMYYSFVVELQRTGCQLVILGGNHDSVAMLNESRELLACLNTRVIACASDDPAQQVILLE
TRQRQPGALLCAIPFLRPRDVLTSKAGQSGDEKQLALQEAITAHYLQCYQLACQKRDELG
LPLPIIATGHLTTIGATASESVRDIYIGTLDAFPAQAFPPADYIALGHIHRSQRVTQSEH
IRYSGSPIPLSFDELNSEKSVCLVSFAPDTPAQVEILPIPVTQPMQLIKGSLSDIEQQLT
TFQNYQGEKPVWLDIEINTQDYLSDMQKRIQAMTEHLPVEVLLLRRTREQRLQAITQQDK
ETLNELSVHDVFERRLATETDMEDGRQQRVRTLFNQVIDELENSEPAQ
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattatccacaccgccgattggcatttagggcaatatttttataccaaaagccgc
gctgctgaacatcaggcttttctgcactggcttatcgctcaggtggaacaacatcaggtc
gatgccattatagtcgcaggcgatatttttgataacggctcgccccccagctacgcgcgg
gaaatgtattatagcttcgtggtagaactacagcgcacgggctgccagctcgttattctc
ggcggcaaccacgattccgtcgcgatgttgaatgaatcccgcgagctgctggcctgcctg
aacacgcgggtgattgcctgcgccagcgacgatcccgcccagcaggtgatcctgctggaa
acccgtcagcgacaacccggcgcgctgctctgcgcgattccgtttttacgtccgcgtgac
gtgttaaccagcaaagccgggcaatccggggatgaaaaacagctggcgctacaggaagcg
attaccgcgcactacttgcagtgttatcaactggcttgccaaaaacgtgacgaactaggc
ctgccgctgccgattattgcaaccggacacctgacgacaattggcgcgaccgcctcagaa
tccgtgcgcgatatctatattggtacgctcgatgccttcccggcgcaggcttttcctcct
gcggattatatcgcgctaggccatattcaccgctcgcagcgcgtgacccaaagcgagcac
attcgctacagcggctcacccattccgttgagttttgatgaactcaacagcgagaagtcc
gtctgtctggtgagttttgcaccagacacgccagcacaagtagaaatactgccgattccc
gtcactcagccgatgcagctgattaaaggtagcctgagtgatattgaacaacagctgacc
accttccagaactatcagggcgagaaacccgtgtggttggatatcgagatcaacacgcag
gattatctgagcgacatgcaaaaacgcattcaggcgatgaccgagcacctgcccgttgag
gtgttgctactgcgccgcacgcgtgaacagcgtctgcaggcgattacccagcaggacaag
gaaacgctaaacgaattaagcgtgcatgacgtttttgaacgtcgtctggcaacggagaca
gacatggaagacggtcgccaacagcgtgttcgcacgctgtttaatcaggttattgatgaa
ctggaaaatagcgagcctgcccaatga
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