Pectobacterium versatile: OA04_12250
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Entry
OA04_12250 CDS
T07772
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pvz
Pectobacterium versatile
Pathway
pvz03030
DNA replication
pvz03430
Mismatch repair
pvz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OA04_12250 (dnaX)
03430 Mismatch repair
OA04_12250 (dnaX)
03440 Homologous recombination
OA04_12250 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvz03032
]
OA04_12250 (dnaX)
03400 DNA repair and recombination proteins [BR:
pvz03400
]
OA04_12250 (dnaX)
Enzymes [BR:
pvz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OA04_12250 (dnaX)
DNA replication proteins [BR:
pvz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OA04_12250 (dnaX)
DNA repair and recombination proteins [BR:
pvz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OA04_12250 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_tau_4
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
RuvB_N
AAA_16
AAA_18
ResIII
AAA_2
AAA_14
AAA_assoc_2
AAA_30
AAA_7
RCF1-5-like_lid
nSTAND3
TsaE
PIF1
Motif
Other DBs
NCBI-ProteinID:
AVT57839
LinkDB
All DBs
Position
1332559..1334646
Genome browser
AA seq
695 aa
AA seq
DB search
MSYQVLARKWRPQTFAHVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCEQGVTATPCGQCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
EQIRAHLEQVLQAENLVSEPRALQLLARAADGSLRDALSLTDQAIAMGQGQVTTDSVSHM
LGTLDDEQPLALIEALAKGDGAQVMSLLDQVAARGVDWESLLVETQTLLHRIAMVQLLPA
ALGDDYAAVEARMRELARALPPADVQLYYQTMLIGRKELPFAPDRRMGVEMTLLRALAFH
PSQIIAEPVAPVSAAPAQAARAPSIIQPSLQTLAQQPVATTSATVRAPMPQNTASPEDMP
PPSYSSEPPMDASAYAPPLGEMPASTGSADQYSESELPDATSQLLQARSQLLRKQGSTPP
KKADPAASDNTRPATSALERLASVTERSIQRQNAKTSTSEPKKPEAYRWRAQNKVEEEKV
DVATPKALRSALEHEKTPELAARLAEESLERDAWAAEIHRLTLPKLVQQLALNAFKESEE
AGKIHLHLRSSQRHLNSPAAQKTLLDALTAHYGHPVELLITEDDNPAVRTPLEWRQAIYE
EKLAQARQSILADTTIQTLRRFFDAELDEESIRPV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttcttgcccgtaagtggcgtccccaaacctttgcccatgttgtcggt
caggagcatgtcctgaccgcgttggctaatggcctttccctaggcagaattcatcacgcg
tatttgttttctggcacccgcggtgtcgggaagacgtcgattgcccgtttgctggcaaaa
gggctgaattgcgaacagggcgtgacggcaacgccttgtggtcagtgtgacaactgccgc
gaaatcgaacagggccgttttgtcgatttgatcgaaatcgatgcggcgtctcgcactaaa
gtcgaagacacgcgcgatctgctggataatgtgcagtacgcccccgctcgtgggcgattc
aaggtgtatctgatcgacgaagtacacatgctatcgcgccacagctttaatgcactgctg
aaaacgctggaagaaccgcctccgcacgtcaaattcctgctggcgaccaccgatccacaa
aaactgcctgtgaccattctgtcacgctgcctgcaatttcacctcaaagcgctggatgtt
gaacagattcgcgcgcatctggaacaggtattacaggctgaaaatctcgtcagtgagccg
cgtgcgttacagcttctggcgcgagctgccgatgggagtttgcgtgatgcgctgagtctg
accgatcaggctattgctatggggcaagggcaggtgacgacggattccgtcagccacatg
ctgggcacgctggacgatgagcaaccgctagcactcattgaagcgctggcgaaaggcgat
ggggcacaggtcatgtcgctattagaccaggtcgcggcacgaggtgtggattgggaatcg
ctgctggtagaaactcagacgctgttgcatcgtattgcgatggttcaactgctgcccgct
gcgctgggtgatgattacgctgcggttgaagcgcgtatgcgagagttagcgcgcgcgctg
ccgccggcggacgtgcagctttattaccagacgatgctcattggccgcaaagaattgcct
tttgcgcccgatcgccggatgggcgttgaaatgacgctactgagagcgttggcgtttcac
cccagccagattatcgccgagcctgtagcgccagtgagcgctgcgccggctcaggctgcg
cgtgcgccttctattattcagccttctctccagactctagcacagcagcctgttgccacg
acatcggcgacggttcgtgcgccaatgccgcaaaatacagcatctcccgaagacatgccg
ccgccatcttactcttccgaaccgccgatggatgcctctgcgtatgcgccgccgctaggg
gaaatgcctgcttcaacggggtctgcggatcaatatagtgagagcgagctgcctgatgca
acttctcagctattacaggctcgcagccagctcctgcgaaaacaggggagtacgccacca
aaaaaggctgatccggcagcgtctgacaacacgcggccggcaacctcagcgctggagcga
ttggcttcggtgactgagcgcagcattcaacggcaaaacgcgaaaacctctacctccgaa
cccaaaaaaccggaagcctatcgctggcgggcgcagaataaagtcgaagaagagaaggtc
gacgtagcgacgccaaaagcgttgcgttcagcattagagcacgaaaaaacgcctgaactg
gcggcacggctagcggaagagtcactggagcgggatgcatgggcggcggaaatccatcgc
ctgacgttgccaaagctggtacaacagctggcactcaatgcgtttaaagagagcgaagaa
gcaggtaagatccatctgcatctgcgttcatcccagcggcacctgaattcgcctgcggcg
caaaagacgctgttggacgcattgacggctcactacgggcatcctgtagaattactgatt
actgaagacgacaacccggcggtacggacgccgctggagtggcgtcaggctatctatgaa
gagaaactggcgcaggcgcgtcagtcgattctggccgatacaacgattcaaacgctgcgg
cgtttctttgatgcggaactggacgaagaaagtatccgccctgtttaa
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