Pectobacterium versatile: OA04_12610
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Entry
OA04_12610 CDS
T07772
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pvz
Pectobacterium versatile
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvz03032
]
OA04_12610 (gyrA)
03400 DNA repair and recombination proteins [BR:
pvz03400
]
OA04_12610 (gyrA)
Enzymes [BR:
pvz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OA04_12610 (gyrA)
DNA replication proteins [BR:
pvz03032
]
Prokaryotic type
DNA Topoisomerases
OA04_12610 (gyrA)
DNA repair and recombination proteins [BR:
pvz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OA04_12610 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
AVT57874
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Position
1375730..1378369
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AA seq
879 aa
AA seq
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MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLTEVVNGCLAYIDDENISLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRRE
VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAASPAEAKASLIAQAWELGSV
ATMLERAGDDAARPEWLEPEFGIRDGHYYLTEPQAQAILDLRLQKLTGMEHEKLLDEYKE
LLAEIAELLYILNSPERLMEVIREELEAIKTQYSDERRTEITANTADINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGRGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPVREYEEGRHIFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSDEAMLFSAEGKVVRFSEQAVRSMGRTATG
VRGINLQGEDRVVSLIIPRGEGDILTVTQNGFGKRTAVSEYPTKSRATKGVISIKVSERN
GKVVGAVQVDAADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDEHVVGLQRVA
EPVEDEELDGVVKVEGEVAEDDDAIDDIDGDDDIAEDDE
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaatcacaccggtcaacattgaagaagagctgaaaagctcg
tatctggattatgcgatgtccgttattgtcgggcgtgcattaccagatgttcgagatgga
ctgaaaccggtacaccgtcgcgtactgtacgcgatgaacgtactgggtaacgactggaac
aaaccgtataaaaaatccgcccgtgtcgtcggggatgtcatcggtaaataccacccgcac
ggcgactctgccgtttatgaaaccatcgtacgtatggcgcagcctttctcactgcgttac
atgctggttgatggtcagggcaacttcggttcgattgatggcgactccgctgcggcgatg
cgttataccgaaattcgcatgtcgaaaattgctcatgaactgctggccgatcttgaaaaa
gagacggtcgattttgtgccgaactatgacggcaccgagcagattcctgacgtcatgcct
acgcgtattcctaacctgctggttaacggttcttccggtatcgcagtcgggatggcaacg
aacattccaccgcataacctgacggaagtcgtgaacggctgtctggcgtatatcgatgat
gaaaacatcagccttgaagggttgatggaacacatcaaaggcccggatttcccgacggcg
gcgatcattaatggccgacgcggcattgaagaagcctatcgtactgggcgcggtaaaatt
tacatccgtgcgcgtgctgaagtggaagcggacgcgaaaaccggacgtgaaaccatcatc
gtgcatgaaattccgtatcaggtgaacaaagctcgcctgatcgagaaaattgccgagctg
gtcaaagataaacgtatcgaaggcattagcgcgctgcgtgacgaatccgataaagacggt
atgcgtatcgtcatcgagattaaacgtgacgccgtgggtgaagtggtactgaataatctg
tactcccagacccagcttcagacgtcattcggcatcaacatggtcgctctgcatcagggc
cagccgaagatcatgccgctgaaggacattctggtcgcgtttgtgcgccaccgccgtgaa
gtggtgacgcgtcgtaccatttttgaactgcgtaaagcccgtgaccgtgcccacattctg
gaaggtctggctattgcgctggcgaacatcgatccgattatcgaactgattcgtcgtgct
gcgtcacctgctgaagcgaaagcgtcgctgatcgcacaagcgtgggagctgggtagcgtt
gctactatgttggaacgtgcgggcgatgatgctgcgcgtccagagtggctggagccagag
ttcggaatccgtgatggtcactactacctgacggaaccgcaggcgcaggcgattctggat
ctgcgtttgcagaaactgaccggcatggagcacgaaaagctgcttgatgaatataaagag
ctgctggcggagatcgccgagctgctttatatcctcaatagccctgagcgcctgatggaa
gtcatccgcgaagagctggaagcgatcaaaacgcaatacagcgacgagcgccgcacggaa
atcacggcgaacaccgctgacatcaacatcgaagatctgatcaaccaggaagatgttgtc
gttacgctgtctcatcagggttacgtgaagtatcagccgctgagcgactatgaagcccag
cgtcgcggtggtcgtggcaagtctgctgcacgtattaaagaagaagactttatcgatcgt
ctgctggtggccaacacccacgacacgattctgtgcttctccagccgtggtcgcttgtac
tggatgaaggtgtaccaactgccggaagccagccgcggtgcgcgcggtcgtccgatcgtc
aacctgctgccgcttgaaccgaatgagcgtattacggcgattctgccagtacgtgaatac
gaagaaggccgccatatcttcatggcaaccgcgagcggtactgtgaagaaaacggcgctg
acggaattcagccgtccgcgtagcgcggggatcatcgcggttaacctgaacgagggtgac
gagctgattggcgtcgacctgaccgacggtagcgatgaagcgatgctgttctctgcggaa
ggcaaagtggttcgcttctccgagcaggcggtgcgttcgatgggccgtacggcaacgggc
gtccgtggtatcaatctgcaaggcgaagatcgcgtcgtttctctgatcattcctcgcggc
gaaggcgatatcctgaccgtcacgcagaatggctttggtaagcgtactgccgtgagcgag
tacccgaccaagtcgcgtgcgacgaaaggggttatctctatcaaggtcagcgaacgtaac
ggtaaagtggttggtgcggttcaggttgatgccgcagaccagatcatgatgatcaccgat
gcgggaacgctggtgcggactcgcgtgtctgaagtcagtatcgttggccgtaacacgcaa
ggtgtcacgctgattcgtacggcggaagacgaacatgttgtcggcctgcaacgcgttgct
gagccggtagaagatgaagagctggatggcgtagttaaagttgaaggcgaagttgccgaa
gacgatgatgctatcgatgacattgatggcgatgatgatatcgctgaagatgacgaataa
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