Pectobacterium versatile: OA04_14250
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Entry
OA04_14250 CDS
T07772
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pvz
Pectobacterium versatile
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvz03400
]
OA04_14250 (phrB)
Enzymes [BR:
pvz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
OA04_14250 (phrB)
DNA repair and recombination proteins [BR:
pvz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
OA04_14250 (phrB)
Prokaryotic type
OA04_14250 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AVT58028
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All DBs
Position
1552696..1554189
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AA seq
497 aa
AA seq
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MTTHVVTHHVVTNVVWLRNDLRVTDNLALYSACQDPNATVLAVFIATPVQWEKHDMAPRQ
AAFLLENLTLVQQALAEKGIPLHYHECADFAASVDWLVQFCAQQQATDLFYHYQYEINER
LRDKQVKDRLADSVVCHGYHDSLLLPPGSVLTGNGEMYKVFTPFRQAFIKRLLESDTTCV
PAPEARGEPIDNTVELAPFSYPQREVDSEDFPRGERAALQQLRRFCREQVQDYDQQRDFP
ALPGTSKLSPYLALGIVSPRQCFNRLRAECPDMLERREGGAFTWFNELVWREFYRHLIVS
WPQLCKHRPFTAWTQWVKWRESPEDLAAWQQGRTGYPIVDAAMRQLNETGWMHNRLRMIC
ASFLVKDLLIDWREGERYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGER
FDPEGRFIRHWLPELAAVPDKDIHQPHRWADKHHHQLNYPLPIVDHKTARQDTLAAFEAA
KNIGMAGNDREENSKYA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcatgtagttacacatcatgtcgttacgaatgtagtctggctacgcaacgac
ctgcgcgttaccgataatctggcgctgtactcggcctgtcaggatccgaacgcgacggtg
cttgccgtctttatcgccacgcccgtacagtgggaaaagcacgatatggctccgcgtcag
gcggcctttctactggagaacctgacgctggtacagcaggcgctggccgaaaaaggtatc
ccgctgcattaccacgaatgtgctgactttgctgcgtcggttgactggctggtgcagttt
tgtgcgcagcagcaggccaccgatcttttctaccattatcagtatgaaatcaacgagcgc
ctgcgtgataagcaggtgaaagatcggctggccgatagcgtggtttgtcacggttatcat
gacagcctgttgttaccgccgggtagcgtgctgacgggtaatggcgagatgtataaggtg
tttacgccctttcgtcaggcctttatcaaacgtctgctggagtcggatacgacgtgcgta
ccagcaccggaagcacgcggtgagccgatcgataacacggtggaactggcaccgttcagc
tatccgcagcgcgaagtggatagtgaagattttcctcgcggtgaacgcgctgcattgcag
caactgcggcgtttttgtcgcgaacaggtgcaggattacgatcagcagcgggattttccg
gcgctacccggcaccagcaaactttctccgtatctggcgcttgggatcgtatcgccgcga
caatgttttaaccgcctgcgtgccgaatgcccggatatgctggaacggcgtgagggcgga
gcattcacttggtttaacgaactggtctggcgtgagttttaccgccacctgattgtctct
tggccgcaactgtgtaaacaccgaccgttcaccgcatggacgcagtgggtgaaatggcgg
gaatcaccggaggatttagccgcctggcaacaggggagaacgggctacccgatcgtagat
gcggcgatgcgtcaactgaatgaaacgggatggatgcacaatcgcctgcgtatgatttgc
gccagttttctcgtcaaagatttactgatcgattggcgtgaaggtgaacgctactttatg
tcgcaactgctggatggcgatctggcggcgaataacggtggctggcagtgggcggcgtca
acaggcaccgacgcggcaccttattttcgtattttcaacccgacaacgcagggcgagcgc
ttcgacccagaaggtcggtttattcgccactggctgcccgaactggccgccgtgccggat
aaagatattcatcagccccatcgctgggctgacaaacaccaccatcagctgaactatccg
ctgccaatcgtcgaccataaaaccgcgcgtcaggatacgctggcggcgtttgaggcggca
aaaaatatcggtatggcgggtaacgatcgagaagagaacagtaagtatgcgtaa
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