Pectobacterium versatile: OA04_20320
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Entry
OA04_20320 CDS
T07772
Symbol
gabR
Name
(GenBank) GntR family transcriptional regulator
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
pvz
Pectobacterium versatile
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvz03000
]
OA04_20320 (gabR)
Transcription factors [BR:
pvz03000
]
Prokaryotic type
Helix-turn-helix
GntR family
OA04_20320 (gabR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_24
HTH_41
HTH_11
Beta_elim_lyase
HTH_Crp_2
Rrf2
DnaD_N
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AVT58601
LinkDB
All DBs
Position
complement(2197372..2198865)
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AA seq
497 aa
AA seq
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MRSLLTDLLLQRLANQQDGALNKRLYDCIRLAILDGAIAAGERLPSSRDLAQQLSLSRNT
VLTAYEQLLAEGYIEARKGSGTFVTEQLPDGNMQPVNSDNAGEIREPKHELSRRGMHLLG
YAGASVRQWGAFMPGIPDIASFPHDLWRRIQTRLTKRVRPEQLSYSPIGGCPELQLALVD
YLRVARSVECTPEQILITEGTHQAMDLLAKMLCNPGDLAWIEDPCYWGIRNVLTINGLRI
APVDVDEQGLAPPETLSPDVAPRLICVTPSHQYPLGAVMSLARRQRLLALAQEHGCWVVE
DDYDSEFRFSGSPIPALQGLQTQSPVIYIGTFSKTLYPGLRVSYMVLPPLLAQSLKTAHS
ELYRGGHWLTQATLAQFIREGHYAAHIRRMRLLYAKRRALLTSLIEQHLGADYVGDNSNA
GLHMLLSLPSHIDDVVLSAAILRRGVMVKPLSSYYLQPTQQRGLLLGYASVEESQMTQAF
SVIVACIQTLHTRHSGA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
ttgcgctcacttctgaccgacttattgcttcagcgtttagcgaaccagcaagacggcgcg
ctgaacaagcgtttgtacgactgcattcggctagcgattcttgatggcgcgattgccgct
ggcgagcgtctgccgtcgtcacgcgatttggcgcagcagctgtcgctgtcgcgcaatacc
gtgctgacggcttacgaacagctactggcagaaggctatattgaagcgcgcaaaggaagc
gggactttcgtcacggaacagttacccgatggcaatatgcagccggtgaacagcgacaac
gccggggagatacgtgagcctaagcatgagctttcgcgtcgcggtatgcatctgctgggt
tatgccggtgcttccgtccggcaatggggagcgtttatgcccggcattcccgatatcgcc
agcttccctcatgatttatggcggcgtattcaaacgcgcctgacaaagcgtgttcgcccc
gaacagctctcctattcgccgattggcggttgccccgaactacagttggcactggtagat
tacctgcgcgtcgcccgttctgtggagtgtacgccggagcagattctgattaccgaaggc
acccatcaggcgatggatttgctagctaaaatgctgtgtaaccctggcgatttggcgtgg
attgaagatccctgctattggggcattcgtaatgttttgacgattaacggcctgcgcatt
gctcccgtcgatgtcgatgagcaagggctggcaccgccagaaacgctctcacctgacgtc
gccccgcgcttgatttgcgtgacaccgtcacatcaatatccgctgggtgcggtgatgagc
ctggcacgccgtcaacggttgctggcactggcgcaggagcacggctgctgggtggtggag
gatgactacgacagtgaatttcgcttttccggcagcccgatccccgcgctgcaagggcta
cagacgcaatcaccggtgatctacatcggtacattcagcaaaacgctctaccctggcctg
cgcgtgagctacatggtgctaccgccgctgctggcgcagtcgctgaagacggcacattcc
gaactctatcgcggcggacactggctcacgcaggcgacgctcgcgcagtttatccgcgaa
ggccactacgccgcgcatatccgccgcatgcgcctgctatatgccaagcgtcgcgcgcta
ttgacgtccctgatcgaacaacatctgggcgcagattacgtcggggacaacagcaacgcc
gggctgcatatgctgctcagcctgccttcccacatcgatgatgtcgtgctgagcgccgcg
attttgcgccgtggcgtgatggtcaaaccgctttccagttactacctgcaaccgacacag
cagcgcggtttattactgggctatgccagcgtggaagagagccaaatgacgcaggctttt
tccgtgattgtggcctgtattcagacgctacatacacgtcattccggtgcctga
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