Pectobacterium versatile: OA04_21040
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Entry
OA04_21040 CDS
T07772
Symbol
pelP
Name
(GenBank) endo-pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pvz
Pectobacterium versatile
Pathway
pvz00040
Pentose and glucuronate interconversions
pvz01100
Metabolic pathways
pvz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
OA04_21040 (pelP)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OA04_21040 (pelP)
Enzymes [BR:
pvz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
OA04_21040 (pelP)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_2
EFG_IV
Motif
Other DBs
NCBI-ProteinID:
AVT58671
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Position
complement(2292900..2294606)
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AA seq
568 aa
AA seq
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MKRFALSLLAGLVALQASAATPDRLTVVNQYVDNVLTKAGDHYHGQSPTPLLADGVDPRT
GKQMEWIFPDGRHAVLSNFSAQQNLMRVLVGLSNLSGNPSYKQRAEAIVKYHFQHYQDES
GLLIWGGHRFVDLKTLQPEGPSEKEMVHELKNAYPYYDLMFSVDKDATARFIRGFWNAHV
YDWKIMETSRHGKYGQKIGALWQSPFEQQPPFFATKGLSFLNAGNDLIYSASLLYKYNKE
DGALVWAKRLAQQYVLPRDKATGLGVYQFTQALKRDETTDDADTHSKYGDRAQRQFGPEF
GPTALEGNMMLKGRTSTIYSENALMQLQLGKDLGAEGKELLTWTTDGLKAFAKYAYNESD
NTFRPMLANGKDLSNYVLPRDGYYGKKGTVIKPYPADNSFLLSYARAYTVLPDAELWRVA
RGIARAQGLGELGSAPGKDVKVDLATKNNDPYALFALLDLYQASKVKDYLSLAEKVGDNI
ISTRYQNGFFMAEPNRQYADVDTIEPYALLALEAAVRNQPQSVAPFLNGAGFTEGGYRME
DGSTRVSTRDNEIFLLNVGETLKPNNKK
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatttgcgctgtcgctccttgcgggtttggtcgctttacaggccagcgccgct
acgcctgaccgcctcaccgtcgtcaatcagtatgtggataacgtgctgaccaaagccggc
gaccactatcacggccagtcgcctacgccattacttgctgatggtgtcgatcctcgcaca
ggcaaacagatggagtggatcttccccgatggtcgccacgccgtgttatccaacttttcc
gcacagcagaacctgatgcgcgtgctggtcgggctcagtaacctgagcgggaaccccagc
tataagcaacgtgccgaagcgattgtgaaataccattttcaacattatcaggatgagagc
ggcctgctgatttggggaggccaccgttttgtagatctaaaaacgttgcaaccggaaggc
cccagcgaaaaagagatggtgcatgagctgaaaaatgcctatccctactacgatttgatg
ttcagcgtcgataaagacgcaaccgcacgctttattcgcggtttctggaatgcgcacgtt
tatgactggaagattatggaaaccagtcgtcacggtaaatacgggcaaaaaataggcgcg
ctctggcaaagcccgtttgagcaacagccgcccttcttcgccaccaagggcctcagcttc
ctgaatgcagggaacgatctgatctattccgcatcactgctgtacaaatacaataaagaa
gacggcgcgctggtctgggcaaaacgtctggcacagcagtatgtgctgccacgggataaa
gcgaccgggctcggcgtgtatcagtttacgcaggcgctgaagcgcgatgaaactaccgac
gatgccgatacgcattccaaatacggcgatcgcgcccagcgtcagtttggcccagagttt
ggccccaccgcgctggaaggcaatatgatgctgaaaggacgcaccagtacgatctattcc
gaaaatgcgctcatgcagctccagttgggtaaagatttaggcgcggaaggcaaagaactt
ctgacgtggacaaccgatggcctgaaagcctttgccaaatatgcctataacgagtcggat
aacacgttccgcccgatgttggctaacggcaaagatctctccaactacgttctgccgcgt
gacggttactacggcaaaaaaggcaccgtgatcaagccttatcctgcggataattcattc
ctgctttcctatgctcgcgcctataccgtgttaccggacgccgagctgtggcgtgtcgca
cgcggcatcgctcgcgcacaggggttaggcgaattaggttcagcaccgggtaaagacgtc
aaagtggatctcgccaccaagaacaacgatccttacgccctgttcgcgctgctggatctg
tatcaggctagcaaagtgaaagactatctgtcgttggcggaaaaagtgggcgataacatt
atcagcacgcgttatcaaaacggcttctttatggccgagcccaacagacaatatgccgat
gtcgataccatcgagccttatgccctgttagcgttggaagctgcggtgcgcaatcagcca
cagtccgttgcaccgttcctgaatggtgcgggcttcaccgaaggtggctaccgtatggaa
gatggctcaacacgtgtgtccactcgcgataacgagatcttcctgttgaacgttggcgaa
acgttgaaacccaacaacaagaagtaa
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