Pectobacterium versatile: OA04_24410
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Entry
OA04_24410 CDS
T07772
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pvz
Pectobacterium versatile
Pathway
pvz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OA04_24410 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvz03400
]
OA04_24410 (ruvB)
Enzymes [BR:
pvz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OA04_24410 (ruvB)
DNA repair and recombination proteins [BR:
pvz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OA04_24410 (ruvB)
RecFOR pathway proteins
OA04_24410 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_3
AAA_22
AAA_16
TIP49
AAA_14
nSTAND3
Rad17
AAA_18
AAA_2
AAA_17
NTPase_1
RNA_helicase
Bac_DnaA
AAA_28
TsaE
AAA_24
NB-ARC
ABC_tran
NPHP3_N
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
AVT58991
LinkDB
All DBs
Position
complement(2647974..2648984)
Genome browser
AA seq
336 aa
AA seq
DB search
MIEADRLISADAVPEEEFIDRAIRPKLLTEYVGQPQVREQMEIFIQAARKRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNMRTTSGPVLEKAGDLAALLTNLEPNDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYKVADLQYIVSRSAQCLGLDLTSEGALEVARRARGTPRIANRLLRRVRDFSEVKSEG
AITGDVATQALDMLAVDTEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPFLIQQGFIQRTPRGRMATQHAYRHFGLTREDLG
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagccgatcgtttgatctccgctgatgccgttcccgaagaagaatttatcgac
cgtgcgatccgccctaaattgctcaccgagtatgtggggcagccgcaggtgcgtgagcag
atggaaattttcatccaggcagctcgcaaacgtggggatgcgctggatcatctgctaatt
tttggtcctcccggtctgggtaaaacgacgctggcgaatattgttgctaacgagatgggc
gtgaatatgcgcacgacgtcgggtccggtgctggaaaaagccggcgacctcgccgcgctg
ctgactaatctcgaaccgaatgatgtgctgttcatcgatgaaatccaccgtctgtcgccc
gttgtggaagaagtgctgtatccagcgatggaagattatcagttggatatcatgatcggt
gaagggcctgccgcccgttcgatcaaactcgatttaccgcctttcacgctgattggcgca
acgacgcgtgcaggttcgttaacctcgccgttgcgcgatcgtttcggcattgtgcagcgt
ctggagttttataaagtcgcggacttgcagtatatcgtcagccgcagcgcacagtgttta
gggttggatctgacatctgagggcgcgcttgaagtggcgcggcgcgcgcggggtacgccg
cgtattgctaaccgattattgcgacgggtgcgtgatttctccgaagttaagtcagaaggg
gcgattactggtgatgtggcgacacaggcactggatatgctggcggtagataccgaaggc
tttgactacatggaccgtaagctgctgttggcgatcatcgataaattcatgggcggcccc
gtcgggctggataatttagcggcagcaattggcgaagagcgcgaaacgattgaagacgta
ctggagccgtttctgattcagcaagggttcattcagcgtacgccacgcggtcgcatggcg
acgcagcatgcctatcgacattttggcttaacgcgtgaagatttaggttaa
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