Pectobacterium versatile: OA04_24950
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Entry
OA04_24950 CDS
T07772
Symbol
kdsB_2
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
pvz
Pectobacterium versatile
Pathway
pvz00541
Biosynthesis of various nucleotide sugars
pvz01100
Metabolic pathways
pvz01250
Biosynthesis of nucleotide sugars
Module
pvz_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OA04_24950 (kdsB_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pvz01005
]
OA04_24950 (kdsB_2)
Enzymes [BR:
pvz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
OA04_24950 (kdsB_2)
Lipopolysaccharide biosynthesis proteins [BR:
pvz01005
]
Lipid A
OA04_24950 (kdsB_2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
DUF2683
Motif
Other DBs
NCBI-ProteinID:
AVT59042
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Position
complement(2713874..2714626)
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AA seq
250 aa
AA seq
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MTFTVIIPARFASSRLPGKPLADINGKPMVVHVMERALESGAQRVIVATDHPDVEAAVRQ
AGGEVCLTRADHNSGTERLAEVIERYGFTDDDIIVNVQGDEPLIPSVIIRQVAENLAASK
AGMATLAVPIETSEEAFNPNAVKVVTDAEGYALYFSRATIPWDRERFAQSKETIGDHFLR
HIGIYAYRAGFVRRYVSWAPSQLEQIELLEQLRVLWYGEKIHVAVAKAVPSVGVDTPEDL
ARVRHVMANQ
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgacctttactgtgatcattcctgcgcgttttgcgtcaagccgactgccgggtaaaccg
ctggcggacatcaacggcaaaccgatggtcgtccatgtgatggaacgggcgctggaatcg
ggggcgcagcgcgttattgtggccaccgatcaccccgacgtcgaggctgccgtgcggcaa
gctggtggcgaagtgtgcctgacccgtgccgatcataattctggtactgagcgtctggct
gaagtcatcgagcgttacggttttaccgatgatgacatcatcgttaacgttcagggcgat
gaaccgctcattccttccgttatcattcgtcaggtggcggaaaacctcgctgccagtaaa
gcaggaatggcaacgctggcggtgccgattgaaaccagtgaagaagcattcaacccgaat
gcggtaaaagtggttaccgacgctgagggatacgcgctgtatttttcccgagcgactatt
ccctgggacagagaacgttttgctcagtctaaggaaaccattggcgatcacttcctgcgt
catatcggtatttatgcttaccgtgcgggttttgtgcgtcgttatgtcagttgggcaccg
agccaactggagcaaatcgaattgctggagcaactgcgcgtgctgtggtacggcgagaag
attcacgttgcagtcgcgaaagccgttcctagcgttggcgtggataccccagaagatttg
gcccgtgtgcgacacgtcatggcgaatcagtaa
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