Pectobacterium versatile: OA04_29650
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Entry
OA04_29650 CDS
T07772
Name
(GenBank) O-succinylhomoserine (thiol)-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
pvz
Pectobacterium versatile
Pathway
pvz00260
Glycine, serine and threonine metabolism
pvz00270
Cysteine and methionine metabolism
pvz00450
Selenocompound metabolism
pvz00670
One carbon pool by folate
pvz01100
Metabolic pathways
pvz01110
Biosynthesis of secondary metabolites
pvz01230
Biosynthesis of amino acids
Module
pvz_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
OA04_29650
00270 Cysteine and methionine metabolism
OA04_29650
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
OA04_29650
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
OA04_29650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvz04147
]
OA04_29650
Enzymes [BR:
pvz01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
OA04_29650
Exosome [BR:
pvz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
OA04_29650
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AVT59500
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All DBs
Position
3228827..3229984
Genome browser
AA seq
385 aa
AA seq
DB search
MPQFDTQTVHAGYTPDSTGAVMPAIYATSTFAQPAPGEHTGYEYSRSGNPTRAVLEAAIA
ELEGGTRGFAFASGLAASSTLLELLDQGSHIVAVDDLYGGTWRLLENVRKRTAGLQVTYV
DPADLTALEHAITPQTKMIWVETPTNPLLKLADLAAIATLAKKHQIISVADNTFASPAIQ
RPLDVGFDIVVHSATKYLNGHSDVIAGLAVVGKNSELASQLAYLQNAIGGVLDPFSSFLT
LRGIRTLALRIERHNQSALQLAHWLELQPQVEQVYYPGLPSHPQHGLAQQQMRGFGGMIS
VRLKGDEDYARNVIKRTRLFTLAESLGGVESLISQPYSMTHASVPLEKRRQKGITPQLLR
LSVGIENVQDLIDDLYQALNVNAVS
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaattcgatacccaaaccgtccacgcgggctataccccggacagcactggcgcg
gttatgcccgcgatttatgcaacctccacatttgctcagcccgcacccggagagcatact
ggctacgaatattcacgcagcggcaacccgacgcgtgcggtgctggaggcggcgattgcc
gaactggaaggtgggacgcgaggcttcgcttttgcctccggtctggcggccagttccaca
ttgctggaactgctcgatcagggtagccatatcgtggccgtggacgatctctacggcggc
acctggcgtctgttagaaaatgtccgcaaacgcacagccggattacaggtgacctacgtt
gaccccgccgacctcaccgcgctggaacacgccattacgccgcagacaaaaatgatctgg
gttgaaacgccaaccaacccactgctgaaactggccgatctggcagccatcgccacgctc
gctaaaaagcatcagatcatcagcgtggcggataacacgtttgcttcaccggcgattcag
cgcccgctggatgtggggtttgatatcgtggtgcactccgcaaccaaatacctcaacggc
cattcagatgtgattgccgggctggcggtggtcggcaagaacagtgaactggcgtcacag
ctggcctatctgcaaaatgcgattggcggcgtgctcgacccattcagcagcttcctgacg
ctgcgcggcatccgcacgctggcgctgcgaattgaacgtcacaatcaaagcgcccttcaa
ctcgcacactggctggaactccagccgcaggtggagcaggtttactatccggggctaccg
agtcacccgcagcacggcttggcacagcagcagatgcgcggctttggcggcatgatctct
gtgaggttgaaaggcgatgaggactatgcgcgtaacgtcattaagcgcacgcgattattt
acgctggcagagagtctgggtggcgtggaaagcctgattagccagccctactccatgacc
cacgcttccgtgccgttggaaaaaagacgacaaaaaggcatcacgccacagctgctgcgt
ttatccgtggggattgaaaatgtgcaggacttaatcgacgacctgtatcaggcactgaat
gtgaacgcagtgagttaa
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