Pectobacterium versatile: OA04_31130
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Entry
OA04_31130 CDS
T07772
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pvz
Pectobacterium versatile
Pathway
pvz00040
Pentose and glucuronate interconversions
pvz01100
Metabolic pathways
pvz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
OA04_31130
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OA04_31130
Enzymes [BR:
pvz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
OA04_31130
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Glyco_hydro_43
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AVT59643
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Position
complement(3387043..3388611)
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AA seq
522 aa
AA seq
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MLRTVIGTGRLRSCAVAIALSGIVLSGCDNSQKPVAEAAPPDLQVKTAPFGWAAQYHNTD
GKFYATTGGEGAHENSIYVVTSRQELKDALNNIRSPRYIAGDADAELKAKLEPKIIYWQG
TIRGDDLGNGRYANAEDYKTKPNKTTFDFDLYVKAFDQNYMEQLKATADAGGSDAAAAST
QLNLLKKQNGQRSQYANNQKAQIQFQVPPNTTILGVGSEAKLVEGYLSLNTLSNTFGKTD
NSNIIIRNITFQAPRDFAPAWDAGDGDKGNWNARYDSVSINASKNVWIDHCTFTDGDYPD
HLEPVLFGKHIQRHDGLLDIEDGADYLTISYNIFAQHDKTVLIGSGDGDKGEYRITFEGN
LWDNSVQRSPRVRFGQVHLLNNYHRGATDTNYPILYAIGMGFDSSILSESNVFNFQGGGA
DEKLIIGAYKGSKFKDNGSWFNGNPASNLNQIAVDKCSTLQEAEKAAATNSGKAVPAWAL
ETCTNELEWSPPYVYSAGKSIAAVEKYVLENAGAGKLDISLP
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgcttagaacggttattgggactggtcgtttacgctcctgtgcggtagctattgccctt
tccgggatcgtgctttctgggtgtgataatagtcagaagcccgtggcagaagcggctccg
ccagatttgcaagtgaaaacggcaccgtttggttgggctgcgcaatatcataatacggat
ggtaaattttatgcgacgacggggggcgagggtgcgcatgaaaatagcatttatgtcgtc
accagccgtcaggaattaaaagatgcattaaataatatccgcagcccccgttatatcgcc
ggtgatgccgatgcggaattgaaggcaaagttagaaccaaaaattatctactggcaaggc
actatccgtggtgatgacttaggcaatggacgctatgccaatgcagaggattataaaacc
aaaccgaataaaacaacgtttgattttgatttatacgtcaaagcgttcgatcagaattat
atggagcagttgaaagcgacggcggatgccggtggaagcgacgcagcggcagctagcaca
cagcttaatctgttgaaaaagcagaatggtcaacgttcgcagtatgccaacaaccagaag
gcgcagattcaatttcaggtaccgccaaataccacgattttaggcgtgggtagcgaagca
aaactggtggaaggctatttatccctcaataccctgagcaatacgttcggtaaaacggat
aacagcaacatcattatccgtaatattacgtttcaggcaccgcgtgactttgccccagcc
tgggatgcgggcgatggtgataaaggcaactggaatgcgcgttatgattccgtatcgatt
aatgccagtaaaaatgtctggatcgaccactgcacgtttacggacggtgactatccagat
catttagaaccggtgttatttggcaagcatatccaacgccacgacggtttgctggatata
gaagatggagctgactacctgacgatttcctacaacatcttcgcccaacatgacaaaacg
gtattaattggctccggcgatggtgataaaggggaataccgaatcacttttgaaggcaat
ttatgggacaacagcgtgcagcgttcaccgcgtgtgcgctttggtcaggtgcatttgctg
aataactaccatcgcggggcaacggatacgaattaccccattctgtatgccattgggatg
ggcttcgattcatccattctttccgaaagtaacgtgtttaatttccaaggcggcggggcg
gatgaaaagctgattatcggtgcctacaaaggaagtaaatttaaagacaacggctcctgg
ttcaatggcaatccggcaagcaatttgaatcaaatcgcagtagacaaatgcagcacattg
caagaagccgagaaggccgccgctacaaattctgggaaagccgtaccagcatgggcgctg
gaaacctgcaccaatgaactggaatggagtccgccttatgtgtatagcgcagggaaatcc
atcgctgccgttgagaaatatgttctggaaaatgccggcgcggggaaattggatatttct
ctgccgtag
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