Pectobacterium versatile: OA04_33690
Help
Entry
OA04_33690 CDS
T07772
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pvz
Pectobacterium versatile
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvz03009
]
OA04_33690 (srmB)
Enzymes [BR:
pvz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OA04_33690 (srmB)
Ribosome biogenesis [BR:
pvz03009
]
Prokaryotic type
rRNA helicases
OA04_33690 (srmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AVT59888
LinkDB
All DBs
Position
3665093..3666418
Genome browser
AA seq
441 aa
AA seq
DB search
MTVTNFSELDLDESLLDALRDMGYERPTVIQAEAIPPAMEGRDVLGSAPTGTGKTAAYLL
PVLQHLIDFPRKKSGPPRILILTPTRELAMQVADQARAFAAHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTLLFSATLEGDAIKDFAERLLNEPVEIESDPSRRERKKILQWYYRADDLKHKTALLC
HQLKQPDVTRSIVFVRKRERVHELVAWLREAGINSCYLEGEMVQAKRNEAIKRLSDGRVN
VLVATDIAARGIDINDVSHVFNFDLPRTSDTYLHRIGRTGRAGRKGCAISFVEAHDHLLL
GKISRYLNEPLKPRVIEELRPETKAPSAKTTGKPSKKVLAKRQEKKEKEKEKVKVKVRQR
DAKNVGKRRQPTQKTDEPSAK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaaccaatttttccgagctcgatcttgatgaaagcctgttagacgccctgcgt
gacatgggctacgagcgcccgaccgtgattcaggcagaggcgatccctccggcgatggaa
ggccgcgacgtactgggctccgcgccaacaggtacaggtaaaaccgccgcctatctgctg
ccggttttgcagcatcttatcgatttccctcgtaaaaaatcgggtccacctcgtattctg
atcctcacgccaacccgtgaactcgccatgcaggtggccgatcaggcgcgagcgtttgct
gcacatacgcacctggatatcgccacgatcactggcggcgtggcctacatgaaccacgca
gaagtcttcagtgaaaatcaggatatcgtcgtcgcgacgacgggccgtctgctgcaatac
attaaagaagaaaacttcgattgccgcgcggtagaaacgctgattctggatgaagcggac
agaatgctggatatgggcttcgcccaggatattgaacacatcgccggagaaacccgctgg
cgcaagcaaacgctgctgttttctgcgacgctggaaggggacgcgatcaaagatttcgcc
gagcgcttgctcaatgaacctgttgaaatcgaatccgacccatcgcgtcgggaacgtaaa
aaaattctgcaatggtattaccgcgccgacgatctcaaacacaaaacggcgctgctctgc
caccagttaaaacagcctgacgtaacgcgttctatcgtctttgtacgcaagcgtgagcgt
gtgcatgagctggttgcctggctgcgtgaagcgggcattaactcctgctatctcgaaggc
gaaatggtgcaagccaaacgtaatgaggcgatcaaacgtctcagtgacgggcgtgtcaac
gtgctggtagcaacggatatcgcagcgcgtggtattgatattaacgatgtcagccacgta
tttaacttcgatttgccgcgcacatcggacacctatctacaccgtatcggccgtaccggt
cgcgccggtcgtaaaggctgcgctatctcttttgtcgaagcacacgaccatctgctgcta
ggaaaaatcagtcgctacttgaatgaaccgctaaaaccgcgcgtcattgaagaactccgt
ccagagacgaaagcaccaagcgccaaaacgacggggaaaccgtcgaaaaaagtactggct
aagcgacaagagaaaaaagagaaggaaaaagaaaaggttaaggtaaaagttcgccagcgc
gatgctaaaaatgtgggtaagcgtcgtcaaccaacgcagaaaaccgacgaaccctctgcc
aaataa
DBGET
integrated database retrieval system
