Pectobacterium versatile: OA04_36200
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Entry
OA04_36200 CDS
T07772
Symbol
truD
Name
(GenBank) tRNA(Glu) pseudouridine(13) synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pvz
Pectobacterium versatile
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvz03016
]
OA04_36200 (truD)
Enzymes [BR:
pvz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
OA04_36200 (truD)
Transfer RNA biogenesis [BR:
pvz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OA04_36200 (truD)
Prokaryotic type
OA04_36200 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AVT60105
LinkDB
All DBs
Position
complement(3915508..3916554)
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AA seq
348 aa
AA seq
DB search
MENSEQLVWLHGEPQATGSLKSAAEDFLVVEDLGFQPDGDGEQVLVRVRKRGCNTQFVAE
MLAKFVRLPLRAVSYAGLKDRHAVTEQWFCLHMPGKETPDFSSLELEGCDVLEVIRHRRK
LRIGTLRGNHFTLVLRQVSDRNEVDARLALIAAKGAPNYFGSQRFGRNGNNLEQARLWAN
NEIRVKERSKRSFYLSASRSAMFNQVASARLAGQQAKTVLCGDALQLTGRGSWFVAKPDE
LDVLQTRLDAGELQITAPLPGDGELGTQDDAQLFEKQALVGQDALWSLVKRERVEPARRA
VLLYPQQMHWEWQDDATVELKFWLPAGSFATSVVRELLHSQQDTDLGA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatagcgaacaactcgtctggctgcacggtgagccacaggctaccggctcattg
aaatccgctgcggaagattttctggtggtggaagatctggggtttcagccggatggtgac
ggtgaacaggtattggtgcgtgtacgcaagcgcggatgcaatacgcaatttgtggccgag
atgctggcgaaatttgttcgtctaccgctgcgtgccgtcagctatgcgggcctgaaagat
cgtcatgctgtcaccgaacagtggttctgtctgcacatgccgggaaaagagacgcctgat
ttctcctcgctggagcttgaaggctgcgatgtgcttgaggtgattcgccatcgtcgcaag
ctgcggatcggtacgctgcggggtaaccattttacgctggtgctgcgtcaggtcagcgac
cgaaacgaggttgatgctcgtttggcgctgattgccgcgaaaggcgcgcctaattatttc
ggcagccagcgtttcgggcgcaacggaaataaccttgagcaggctcgtctttgggcaaat
aacgagattcgggtaaaagaacgcagtaagaggagtttttatctttctgccagccgcagt
gcgatgtttaatcaggttgccagtgcacgactcgcggggcagcaggcgaaaaccgtcttg
tgtggtgatgcattgcagctgacagggcgcggcagctggtttgttgctaagcctgacgaa
ttggacgttttacagacgcgccttgatgcgggtgaactccagattactgcgccgctgccc
ggagatggcgaactgggtacgcaggatgacgcgcagctatttgaaaagcaggctttggtc
ggacaagacgcgctgtggtctttggttaagcgtgagcgggtcgaaccagctcggcgtgcg
gtactgctgtatccgcagcagatgcactgggaatggcaggacgatgcgactgtggaattg
aagttctggctacctgcgggcagttttgcgaccagcgtggtgcgtgaattgctgcattca
cagcaggataccgatctcggtgcctga
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