Pectobacterium versatile: OA04_38720
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Entry
OA04_38720 CDS
T07772
Symbol
lcfH
Name
(GenBank) putative long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pvz
Pectobacterium versatile
Pathway
pvz00061
Fatty acid biosynthesis
pvz00071
Fatty acid degradation
pvz01100
Metabolic pathways
pvz01212
Fatty acid metabolism
pvz02024
Quorum sensing
pvz04146
Peroxisome
Module
pvz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
OA04_38720 (lcfH)
00071 Fatty acid degradation
OA04_38720 (lcfH)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
OA04_38720 (lcfH)
09145 Cellular community - prokaryotes
02024 Quorum sensing
OA04_38720 (lcfH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pvz01004
]
OA04_38720 (lcfH)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvz04147
]
OA04_38720 (lcfH)
Enzymes [BR:
pvz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
OA04_38720 (lcfH)
Lipid biosynthesis proteins [BR:
pvz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
OA04_38720 (lcfH)
Exosome [BR:
pvz04147
]
Exosomal proteins
Exosomal proteins of breast milk
OA04_38720 (lcfH)
Exosomal proteins of breast cancer cells
OA04_38720 (lcfH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AVT60354
LinkDB
All DBs
Position
complement(4209191..4211080)
Genome browser
AA seq
629 aa
AA seq
DB search
MTVDCTPNNVQLYAEMLSNSSPLEILLQMNNHLQPYHVVHRVQDQINHCAGRITLREWTP
AGEQQLTWTQAGQRIQRIASALLALGLDVQERVAIFSHNSMNWSLADLALLHLRAISVPI
YATNTAAQAAFIINDADIRTIFVGGQEQLDALLALRDTCPQLRNIIVMDEGVNLRGSDIV
QSLREFEAQAVDDFWREEWQTRIDSRDLNDLFTLIYTSGTTGEPKGVMLDYTNMAMQLKL
HDDRLDMSENDVSLCFLPLSHVFERAWSFVIMHRGAQNVYLSDTNLVRAAMQAVKPTVMC
AVPRFYEKVYSAIHEKVAQAPWYRQRLFNWAIAQGQHAFLASQAVKKGGLFRRVMHRYAD
RLVLGKLRQLLGGEIRFMPAAGARLDDNIILFFRSIGIRIIYGYGMTETCATVSCWEEGR
FRLGSIGTPLPGIEVRIGEEKEIQVRGATIMRGYFHRPQETAETFTEDGWLKTGDAGELD
ANGNLFITERLKDLMKTSGGKYIAPQHLEGTLGQDRFIEQVAIIADTRKYVSALIVPCFE
ALEEYAHSINLKYHDRLELLRHSHIIELFEQRLREMQKELSRVEQVKKFTLLPVPFSMAE
GELTPTLKLRRKIINQRYQLEIDAMYAES
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgacggtagactgcacgccaaataatgtacagctgtacgctgaaatgctgtcaaattct
tcccccttagaaattcttttacagatgaataatcatttacagccataccatgtggtgcac
cgggtccaagatcaaatcaatcactgcgcaggacgtattacgttgcgcgagtggacgcct
gcgggcgaacagcagctcacctggacacaggccgggcagcgcattcagcgcattgccagc
gcgctcttagcgctggggctggatgttcaggaacgggttgcgattttctctcataattca
atgaactggtcgctggccgatctggcattgctgcacctgcgtgcgatcagcgtgccaatc
tatgccacgaatacggcggcgcaggcggcatttatcatcaatgatgcggacatccgtacg
atattcgttggcggtcaggaacagttggatgcgctactggcgctgcgcgatacctgccca
cagctgcgaaacatcatcgtgatggatgagggtgttaacctgcgcggcagtgacattgtg
caatccctgcgcgagtttgaagcgcaggcggtagacgatttctggcgtgaggaatggcaa
acgcgcatcgacagccgcgatctcaacgatctgtttacgctgatttatacctctggcacg
acgggtgaaccgaaaggcgtcatgctggattacaccaacatggcgatgcagctaaagctg
catgacgatcgtctggatatgtcagaaaacgacgtatcgctctgtttcttgccgctttcc
cacgtatttgagcgcgcatggagctttgtcattatgcaccgtggcgcgcagaacgtgtat
ctcagcgatacgaatctggtgcgtgccgcgatgcaggcggtgaagcctaccgtgatgtgc
gccgtgccgcgtttttatgagaaagtttacagcgcaatccatgaaaaagtggcgcaggca
ccgtggtatcgccagcgtctatttaactgggctattgcgcaggggcaacacgcttttctg
gcgagccaggccgtgaagaaaggcggtcttttccgccgcgtgatgcatcgctatgcagac
cgactggtgttagggaaactgcgccaactgctggggggcgagattcgctttatgccagct
gcgggcgcgcgattggatgacaacatcattctgtttttccggtcgattgggattcgcatc
atctatggctacggcatgactgaaacctgcgcgacggtttcctgctgggaagaaggccgc
ttccgcttaggctctattggtacgccgctgccgggcattgaggtccgcattggcgaggaa
aaagagattcaggtacgtggtgcgaccatcatgcggggttatttccaccgtccgcaggaa
accgcagaaacctttaccgaagatggctggttgaaaactggcgatgcgggggaactggat
gccaacggtaacctgtttattaccgaacggttgaaagatctgatgaaaacttcgggcggt
aaatatatcgcaccgcagcatctggaaggcacgctggggcaggatcgcttcattgaacag
gttgcgattattgcggacacgcgtaagtacgtgtctgcgctgattgttccctgtttcgag
gcgctggaagaatacgctcactccatcaatctgaagtaccacgatcgcctggagctactg
cgccacagccatattattgagctgtttgaacagcgtctgcgggagatgcagaaagagctt
tcccgcgttgagcaggtgaagaaattcacgctgttgcctgtaccgttttcgatggcggaa
ggggaattgacgccaacgctcaagctgcgcagaaagatcatcaaccagcgttaccaactg
gaaattgatgcgatgtacgcagagtcttga
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