Pectobacterium versatile: OA04_38970
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Entry
OA04_38970 CDS
T07772
Symbol
hepA
Name
(GenBank) ATP-dependent helicase HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pvz
Pectobacterium versatile
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvz03021
]
OA04_38970 (hepA)
Transcription machinery [BR:
pvz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
OA04_38970 (hepA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
Motif
Other DBs
NCBI-ProteinID:
AVT60376
LinkDB
All DBs
Position
4236570..4239473
Genome browser
AA seq
967 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAVDTRMITLLFPASGENRLYSRSDAPITRVMFNPGDT
VTSHEGWQLKVDDVREEKGLLVYCGQRLDDETSAELREVFLDSKLTFNKPQDRLFAGQID
RMDRFALRYRARKHQNEQARQQWGGLRGMRASLIPHQLHIAHEVGQRHAPRVLLADEVGL
GKTIEAGMIIHQQLLAGRASRVLIVVPETLQHQWLVEMLRRFNLLFSLFDDERYAEAKLD
SSNPFETEQLVICSLGFVQRSAQRFTQLVNADWDLLVVDEAHHLVWSEESPSPEYQAIET
LARATPAVLLLTATPEQLGQQSHFARLRLLDPNRFHDYQEFVAEQQQYRPVADAVTLLLA
GEKAQTAELNALSDLLGEQDIEPLLKAINSDSDDNQKARQELITMLMDRHGTSRVLFRNT
RQGVKGFPQRVLHQIRLPLPAQYQTAIKVSGIMNANKALEVRARDMLYPEQIYQQLEGDD
ATWWNFDPRVEWLLNYLTAHRDEKILVICAQAATALQLEQVLRTREAIRAAVFHEGLSIL
ERDRAAAYFASEEEGAQVLICSEIGSEGRNFQFASHLVMFDLPFNPDLLEQRIGRLDRIG
QAKEIQIMVPYLENTAQALLVRWYHEGLDAFEHTCPTGRTIYDAHHAQLIERLTTVGEQQ
GLDEFIHVCRQQHDSLKQQLEQGRDRLLEMHSNGGEQAQLLAQAIAEQDNDVNLVTFALN
LFDIVGINQEDRSDNLIILTPSDHMLVPDFPGLPQDGCTITFDRDQALSREDAQFISWEH
PLIRNGLDLVLSGDTGSCAVSLLKNKALPVGTLLAELVYVVEAQAPKHLQLTRFLPPTPV
RLLMDRKGTNLAAQVEFESFNRQLNAVNRHTSSKLVNAVQPDVHAMLQQAEALVETQARQ
LITEAQEQADLQLRRELERLEALKAVNPNIREDELTALENQREQVLSNLHEANWRLDAIR
LVVVTHQ
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcagcgctggatcagcgatacggaaagcgaacttggactggga
acggttgttgccgtcgatacgcgtatgattacgctgcttttccctgccagcggtgaaaac
cgactttattcccgcagcgacgcccccatcacccgcgtgatgttcaatcccggcgacacc
gtcaccagccatgaaggctggcagctcaaagtggatgacgtgcgagaagaaaaagggttg
ctggtgtattgcggccaacgcctggacgatgaaacgtcggcggaactgcgtgaagtcttt
ctggacagcaaactgacgttcaacaaaccgcaagatcgcctgttcgccggacagatcgat
cgtatggatcgctttgccctgcgctatcgcgctcgcaagcatcagaacgaacaggcgcgt
caacaatggggcggattgcgcggcatgcgtgccagccttatcccccaccagcttcatatc
gctcatgaagtcggccaacgccatgcgccacgcgttttgctggcggacgaagtcggactg
ggaaaaactattgaggcggggatgatcatccaccagcagttgctggcgggtcgtgccagc
cgcgtgctgattgtcgtgccagaaaccctgcaacaccagtggctggtcgaaatgctgcgc
cgctttaacctgctgttctccctgtttgacgacgagcgctatgccgaagccaagctggac
agcagcaatccgtttgaaactgaacagttggtgatctgctcactgggatttgttcaacgc
agcgcccagcgctttacgcaactcgtcaacgccgactgggatctgctggtggtggatgaa
gcccaccatctggtctggagcgaagaaagccctagcccggaatatcaggctattgaaacg
ttggcacgcgccacgccagccgttctgctgttaactgcaacaccggaacagctcggtcaa
cagagccactttgcgcgattacgcctgctcgatcccaatcgtttccacgactatcaggaa
ttcgttgctgaacagcagcagtatcgtccggttgccgatgccgtcacgctgctgttagcg
ggcgaaaaagcccaaactgctgagctgaatgcgctaagcgacctactgggcgagcaggac
attgaaccgctgctgaaagccatcaacagcgacagcgatgacaatcagaaggcgcgtcag
gaactgatcaccatgctgatggatcgccacggcaccagccgcgtgctgtttcgtaacacc
cgtcaaggggttaaaggcttcccgcagcgtgtcctgcatcaaattcgcctgccgctgcca
gcgcagtaccaaacggcgattaaagtgtccggcattatgaacgcgaataaggcgctggaa
gtccgcgcccgcgacatgctgtacccggaacaaatttatcaacagctcgaaggggacgat
gccacctggtggaacttcgatccgcgcgtggaatggttactgaactacttgaccgcacac
cgtgatgaaaaaatcctggtgatctgtgcacaggcagccaccgcgctgcaattggaacaa
gtgctgcgcacgcgtgaagcaatccgcgccgccgtcttccatgaagggctgtcgattctt
gaacgtgaccgcgccgccgcctattttgcgtccgaagaagaaggcgcacaggtgctgatt
tgttcagagatcggttccgaaggccgtaacttccagtttgccagccatttagtgatgttc
gatctgccgttcaaccccgatctgttggaacagcgtattggtcgtctggaccgtatcggg
caggcaaaagaaattcagatcatggtgccgtatctggaaaataccgcacaggccttgctg
gtacgttggtatcacgaaggattggatgcgtttgaacacacctgtccgacgggtcgtacc
atctatgatgcccaccatgcgcagttgatcgagcggctgacgacggtcggtgaacagcag
ggactggacgagtttatccatgtttgccgtcaacagcacgacagcctgaagcaacagctt
gaacaaggccgcgatcgcctgctggaaatgcattctaacggtggcgaacaggctcaactg
ttagcgcaggccattgccgaacaggataatgacgtcaatctggtgacgttcgccctgaac
ctgtttgatattgttggtatcaatcaggaagatcgcagcgataacctgatcatcctgacg
ccatccgatcatatgttggtgccggatttcccgggcttgccgcaggacggctgtacgatc
accttcgatcgcgatcaggcgctctcccgcgaagacgcacagtttatcagttgggaacac
ccgcttatccgtaacggactcgatctggtactgtccggcgataccggaagctgtgcagtg
tcgctgctgaaaaataaagcgctgccggtcggtacattgctggctgagctggtttacgtt
gtggaagcgcaggcaccgaaacatctgcaactgacccgcttcctgccacctacgccggtt
cgcctgctgatggaccgtaaaggtaccaatctggcagcacaggttgagtttgagagcttc
aaccgccagctcaacgcggtaaaccgtcatacgtccagcaagctggtgaatgcggtacag
cccgatgttcacgccatgctgcaacaggcggaagcgctggtcgaaacgcaggcacgccag
ctcatcaccgaggctcaggagcaggctgacctgcaattgcgccgcgagctggaacgtctt
gaagcgctaaaagccgtcaaccccaacattcgtgaagatgagttgactgcactggaaaac
cagcgcgaacaggtgctgagcaacctgcacgaagccaactggcgtctcgatgctattcgt
ctggttgtggtgacacaccagtaa
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