Pectobacterium versatile: OA04_40110
Help
Entry
OA04_40110 CDS
T07772
Symbol
mscM
Name
(GenBank) miniconductance mechanosensitive channel
KO
K22051
miniconductance mechanosensitive channel
Organism
pvz
Pectobacterium versatile
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvz02000
]
OA04_40110 (mscM)
Transporters [BR:
pvz02000
]
Other transporters
Pores ion channels [TC:
1
]
OA04_40110 (mscM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
AVT60483
LinkDB
All DBs
Position
4363000..4366323
Genome browser
AA seq
1107 aa
AA seq
DB search
MRLILTFLLGCLLSTAALAATAPNEAQLRQQLQQAEANKGAADQAKVVEEYQAALNTLQD
RKESLERATQYQRVIDDFPKLVQELRRQLNAEDGKPSSISESLSSNDLEQQLLQTSSQLL
EQARQLQQEQDRLREISDSLSQLPQQQTEASRMQSEAERRIQSLGTPATPLGQAQLVALQ
AESALRKSRVDELELAQLSASNRQELSRLRVELYKKRHDRLDLLQQDLRSRLNNLRQREA
EQALERTELLAEQSGDLPSVISKQLQVNRELSVALNQQAQRMDLIASQQRQAATHTIQVR
QALSTIREQAQWLGVSPILGETLRAQIARLPEMPKPQLLDSDMAQLRVQRLHFEDLINKP
QDLDNAKQDNGDPLTSAQQRILADQMRTQRDLLTSLISGCDSQILELTKLKVANNQLADA
LTETREAAHRDLFWVADVDPVTFAYPLKLVQDLTRLLSLDTLTQLGSALVMMVTSQETVL
PLLGALLLVGFSISSRRHYHAFMERASSRVGKVTLDHFMLTLRTVFWSILTALPLPVLWA
ALGYGLQNAWPYPIAVAIGDSVTATVPLMWLVMISASFSHPQGLFIVHFRWSPERVARAM
RYYRLSIAFIVPLIMALITFDKLNDREFSSTLGRLCFILLCMALSLVTTGLKRAGIPLYL
DKEGSGENSVNRAMWNILIAMPLVAALASCIGYLATAQALLARLETSVSIWFFLLVVYHI
IRRWMLIQRRRIAFDRAKQRRSEILAQRAKGEEDTPSASSHESSSEAVEEPVVDLDAISA
KSLQLVRSILTLIALVSVIALWSEIHSAFAFMENISLWDVSSTVKGVESVQAITLGSVLI
AILIFIITAQLVRNLPALLELAILQHLDLSPGSGYAITTISKYILMLIGCLMGFSLIGIE
WSKLQWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVMRINTRA
TTISDWDRKEIIVPNKAFITEQFINWSLSDSVTRVVMTVPAPANANSQEVTELLMDAVKR
CSLILDTPEPEAFLVDLQQGIQIFELRVFAAEMGHRMPLRHELHQLILENYRKHNLELPF
PPFQVKMDNLSRSGKTLTPRQRTPGSL
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtctgattctgacttttcttttgggatgtttattatcaactgctgcgttggctgcc
actgcgcccaatgaggcgcagttacgccagcagctacagcaggcagaagccaacaaaggt
gcagccgatcaggcgaaagtcgttgaagaatatcaggctgcactgaacaccctgcaggac
cgcaaagagtcactggagcgcgccacacagtatcaacgcgtcattgatgatttccccaaa
ctggttcaagagctgcgtcgccagcttaatgctgaagacggcaaaccgtcgtctatttca
gaaagtctctccagcaacgatctcgaacaacagctactgcaaaccagcagccagctgttg
gaacaggctcgccagctccaacaggaacaggatcggctgcgtgaaatcagtgattcactg
agccagcttccgcaacagcaaactgaagccagccgcatgcaaagcgaggcggaacgccgt
attcagtctctcggtactcctgctaccccgctggggcaagcgcagcttgtcgcgcttcag
gccgaatccgccctgcggaaaagtcgagtagacgaactggaactggcacagctgtcagcc
agcaatcgtcaagagctgtctcggctacgcgtcgaactgtataaaaagcgtcacgacagg
ctggatctgctgcaacaggatttacgcagcagactcaacaacctacgccagcgcgaagcc
gaacaggcattagaacgtacagaactactcgcggaacaaagtggcgatttacccagcgtc
atcagcaagcagctacaggttaaccgcgagctctccgtcgcgctgaatcaacaagcgcag
cggatggatctcatcgcctctcagcagcgtcaggctgccacgcacaccattcaggttcgt
caggcgctgagcaccatccgcgaacaggcgcagtggcttggcgtctcaccgatattgggt
gaaaccttacgggcacagatcgcccgcttgccggaaatgcccaaacctcagttgctggat
agcgacatggcgcagctgcgcgtacagcgcctgcactttgaagacctgatcaacaaacct
caggatcttgataatgccaagcaggataacggcgatccgctgaccagcgcacagcagcgt
attctggccgatcagatgcgaacccagcgcgacctgctgacgtcactgatctccggctgt
gattcacagatactcgaactgaccaaactcaaagtcgccaataaccagctggcggatgcg
ctaaccgaaacacgggaagcagcccatcgcgacctgttctgggtggcggatgtcgatccc
gtaacgttcgcctatccgctcaaactggtacaggatctgacgcgcctgctgtcattagat
acgctgacgcagctgggtagcgcgctggtgatgatggtgaccagtcaggaaaccgtgttg
ccgctgctgggcgcactgctgctggttggttttagtatcagctcacgtcgccactatcat
gcgtttatggagcgcgccagcagccgtgtcggcaaggtcacgctcgatcactttatgctg
acgctgcgtaccgtgttctggtccatccttaccgccctgccgctgccggtgctctgggcc
gcgttgggatacgggctgcaaaacgcctggccttacccgattgccgtcgccatcggcgac
agcgtgaccgccactgtgccgctgatgtggctggtgatgatcagtgcctcattctcgcat
ccgcaggggctgttcattgtccacttccgctggtcgccggagcgcgtagccagagcgatg
cgctactatcgtctctccatcgcctttatcgtgccgctgattatggcgctgattacgttc
gataagctcaacgatcgcgagttctctagcacgctcgggcggctctgtttcatcctgctt
tgtatggcgttgagtttggtcaccaccggattaaaacgcgcgggtatcccgctgtatctg
gataaagaaggctcgggggaaaactccgttaaccgtgcgatgtggaacatcctgatcgcc
atgccgctcgttgctgcgctggcctcctgcataggctatctggcgaccgcacaggcactg
ttagcccgtctggaaacctccgtttctatctggttcttcctgctggtggtttaccacatt
atccgccgctggatgttaattcagcgccgccgcatagccttcgaccgcgccaaacagcga
cgttcggaaattctggcgcagcgtgccaaaggtgaagaagacacgccgtctgcatcatcc
catgaaagcagttcggaagcggtggaagagcccgttgtcgatctggacgccatcagcgcc
aaatccttgcagttggtgcgttccatcctgacgttgatcgcactggtttccgttatcgca
ctgtggtcggaaattcattccgccttcgcgttcatggaaaatattagcctgtgggatgtc
tccagcacggtcaagggcgtggaaagcgtgcaggcgattacgctgggatcggtactgatc
gcgattctgatctttattattaccgcgcaactggtgcgtaacttgcccgccctgctggag
ctggcgatcttacagcatctggatctatcaccgggcagcggctacgccattaccaccatc
agcaaatatattctgatgctgatcggctgtctgatggggttctcgttgatcgggatcgaa
tggtcgaaacttcaatggctggttgctgcactgggtgtggggctcggattcggtttacag
gagatcttcgccaactttatctccggcctgatcatcctgttcgagaaaccgatccgtatc
ggcgatacggtcacgatccgcgatctcacgggtagcgtcatgcggattaacacccgtgcc
accacgatttcagactgggatcgcaaagagatcatcgtaccgaacaaggcctttatcaca
gagcagtttatcaactggtcgctgtcggattcggtcacgcgtgtggtgatgacggtgcct
gctcccgcgaacgcgaacagtcaggaagtcacggaactgctgatggatgcagtgaagcgt
tgttcgctaattctggatacgccagagcccgaagccttcctcgttgacctgcaacagggc
atccagattttcgagctgcgcgtgttcgccgccgaaatggggcaccgtatgccgctgcgt
cacgaactgcatcagctgattctggaaaactaccgcaaacacaatctggagcttcctttc
ccaccattccaggtgaaaatggacaatctgtcgcgcagtggaaaaacgctgacgccacgg
cagcggacgccgggcagcttataa
DBGET
integrated database retrieval system
