Pectobacterium versatile: OA04_41210
Help
Entry
OA04_41210 CDS
T07772
Symbol
pelC
Name
(GenBank) pectate lyase III
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pvz
Pectobacterium versatile
Pathway
pvz00040
Pentose and glucuronate interconversions
pvz01100
Metabolic pathways
pvz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
OA04_41210 (pelC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OA04_41210 (pelC)
Enzymes [BR:
pvz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
OA04_41210 (pelC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AVT60584
LinkDB
All DBs
Position
4459841..4460965
Genome browser
AA seq
374 aa
AA seq
DB search
MKYLLPSAAAGLLLLAAQPTMAANTGGYATTDGGDVAGAVKKTARSMQDIIDIIEAAKLD
SNGKKVKGGAYPLVITYNGNEDALIKAAEANICGQWSKDARGVEIKEFTKGITILGTNGS
SANFGIWLTKSSDIVIRNMRFGYMPGGAQDGDAIRIDNTPNVWIDHNEIFAKNFECAGTK
DGDTTFESAIDIKKASTNVTISYNYIHGIKKVGLSGFSSSDTGRDLTYHHNIYDDVNARL
PLQRGGQVHAYNNLYTGITSSGLNVRQKGIALIERNWFENAKNPVTSRYDGSNFGTWELR
NNNVMSPADFAKYNITWDKDTKPYVNAEDWKSTGTFASVPYSYSPVSAQCVKDKLANYAG
VNKNLAVLTAANCN
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctactgccttctgcagccgctgggctgttattgcttgcggcccaaccaacg
atggcggcaaatacggggggttatgccaccactgacggtggtgacgttgccggtgccgtg
aaaaaaacagcgcgctccatgcaagatattattgatatcatcgaagccgcgaagctggat
tccaatggcaagaaagtcaaaggtggcgcttacccgcttgtcatcacctataacggtaat
gaagacgcgctgatcaaagccgctgaggccaacatctgcggccagtggagtaaggatgcc
cgaggtgtggaaatcaaagagttcaccaaagggattaccatccttggaactaacggatcg
tccgccaacttcgggatctggctgacaaagtcatccgatatcgtcatacgtaacatgcgt
tttggttacatgccgggcggcgcgcaggatggcgatgccattcgtatcgataacacgccg
aacgtctggattgaccacaacgagatcttcgcgaaaaactttgaatgcgcaggcacaaaa
gacggtgacacgacattcgaatccgcgattgatattaagaaagcttcgaccaacgtgacc
atttcgtacaactacattcatggcatcaaaaaagtggggctgagcggcttcagcagcagc
gatacgggccgtgacctgacttatcatcacaatatttacgacgacgttaacgctcgcctc
ccactgcaacgtggtggtcaggttcatgcctacaacaacttgtatactggcatcaccagc
tctggcctgaacgtgcgtcagaaagggattgcgctgatcgaacgtaactggttcgagaat
gcgaaaaacccagtgacctcacgttatgacggttccaacttcggtacgtgggaactgcgt
aataacaacgtcatgagcccagccgacttcgctaaatacaacatcacttgggataaagat
accaaaccctacgtgaatgccgaagactggaaaagcaccggtacgtttgcttctgttcct
tacagctactctccagtttctgcacagtgtgtgaaggacaaactggcgaactatgctggc
gtgaacaaaaaccttgccgtgctgacagcagcaaattgcaactag
DBGET
integrated database retrieval system
