KEGG   Pectobacterium versatile: OA04_42390
Entry
OA04_42390        CDS       T07772                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pvz  Pectobacterium versatile
Pathway
pvz00300  Lysine biosynthesis
pvz00470  D-Amino acid metabolism
pvz01100  Metabolic pathways
pvz01110  Biosynthesis of secondary metabolites
pvz01120  Microbial metabolism in diverse environments
pvz01230  Biosynthesis of amino acids
Module
pvz_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pvz00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    OA04_42390 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    OA04_42390 (dapF)
Enzymes [BR:pvz01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     OA04_42390 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF CntK_N
Other DBs
NCBI-ProteinID: AVT60700
LinkDB
Position
complement(4601035..4601859)
AA seq 274 aa
MQFAKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHCGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIAVSTQTGRMVLSVTDDELVRVNMGE
PNFEPQQVPFRAVKAEKTYIMRADEHTVLCGVVSMGNPHCVIQVEDVDTAKVETLGPLLE
SHERFPERANIGFMQIVDSHTVRLRVYERGAGETQACGSGACAAVAVGIQQGLLSANVRV
SLPGGELDIQWDGPGHPLFMTGPATHVYDGFIHL
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcagttcgctaagatgcacgggttaggcaacgatttcatggttgttgatgccgttacg
caaaacgtttatttttcacccgaattgattcgccgtttggcggatcgacactgtggtgtc
gggttcgaccaactgctggttgtcgagccgccctacgatcctgaactggattttcattac
cgcatttttaacgcggatggcagcgaagtggcacagtgcggtaatggcgcgcgctgcttt
gctcgctttgtccgcttgaaagggttaactaacaagcgtgacatcgccgtcagtacgcag
acgggccgaatggtactgtcggtaaccgatgacgaactggtgcgcgtcaacatgggcgaa
ccgaatttcgagccgcaacaggtgccttttcgcgcggtcaaagcggagaaaacttacatc
atgcgtgccgacgagcatacggtgctgtgtggcgtggtgtcgatgggcaacccgcactgt
gtgattcaggttgaggatgtggacacggcgaaggtagaaacgctggggccgctgctggaa
agccacgagcgttttcccgagcgtgccaacatcggctttatgcaaattgttgatagccac
actgtccgtctgcgggtgtatgaacgcggtgcgggagaaacgcaggcgtgcggtagcggc
gcgtgtgctgctgtggcggtagggatccagcaggggttattgtccgcgaacgttcgcgta
tctctgccgggcggggaattggatatccagtgggatgggccgggacatccgttattcatg
accgggcctgcaacgcatgtctacgatggatttattcatttatga

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