Pectobacterium versatile: OA04_42750
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Entry
OA04_42750 CDS
T07772
Symbol
rffG
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pvz
Pectobacterium versatile
Pathway
pvz00521
Streptomycin biosynthesis
pvz00523
Polyketide sugar unit biosynthesis
pvz00525
Acarbose and validamycin biosynthesis
pvz00541
Biosynthesis of various nucleotide sugars
pvz01100
Metabolic pathways
pvz01110
Biosynthesis of secondary metabolites
pvz01250
Biosynthesis of nucleotide sugars
Module
pvz_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
pvz_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OA04_42750 (rffG)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
OA04_42750 (rffG)
01055 Biosynthesis of vancomycin group antibiotics
OA04_42750 (rffG)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
OA04_42750 (rffG)
00525 Acarbose and validamycin biosynthesis
OA04_42750 (rffG)
Enzymes [BR:
pvz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
OA04_42750 (rffG)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
AVT60731
LinkDB
All DBs
Position
complement(4636418..4637485)
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AA seq
355 aa
AA seq
DB search
MKRILITGGAGFIGSALVRYILTETQDSVVVVDKLTYAGNLSSLAPVADSSRFAFEQVDI
CDRTELDRVFTVYQPALVMHLAAESHVDRSIDGPAAFIETNIVGTYTMLEAARHYWQNLA
DADKCAFRFHHISTDEVFGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGF
PTVITNCSNNYGPYHFPEKLIPLVILNAVAGKPLPVYGDGAQIRDWLFVEDHARALYKVV
TEGEIGETYNIGGHNERKNIEVVQTICVLLEELAPNKPAGVAHYRDLITYVKDRPGHDMR
YAIDAGKIERELGWRPEETFETGMRKTVSWYLNNEKWWRSVQDGSYTGERLGLSD
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacgtattttaattaccggcggggcaggatttattggttccgcgttagtcagatac
attctgactgagacgcaggacagcgtcgtcgttgtcgataaactgacttatgcaggtaac
ctgtcttcgctggcaccggtcgcggatagctcacgttttgcgttcgagcaggtggatatc
tgcgatcgcactgaactggatcgcgtctttacggtttaccagcctgcgctggtgatgcat
ctggcggcagaaagccacgtcgatcgctctatcgatggcccagcagcgtttatcgaaacc
aatattgtcggcacctatacaatgctggaagcggcacggcactactggcagaacctggct
gatgcggacaagtgtgcgttccgttttcaccatatctctaccgatgaagtgtttggtgac
ctgcacgggacggacgatctgtttacagaaaccacgccttatgcgccaagcagcccttat
tccgcatcgaaagcctccagcgaccaccttgttcgcgcctggctgcgcacttacgggttc
ccgacggttatcaccaactgctcgaataactacggcccttaccatttcccagagaagctg
attccgctggtgatcctgaatgcggtcgcgggcaaaccgttacccgtttacggcgacggc
gcgcaaatccgtgactggctgtttgtcgaagaccacgctcgtgcattgtacaaagtagta
acggaaggcgaaatcggcgagacgtacaacatcggcggtcataacgagcgtaaaaatatt
gaagtggtgcagaccatttgcgtgctgctcgaagagctggcaccgaataagcccgctggc
gtagcgcattaccgcgatctcatcacctacgtgaaagaccgccctggccacgacatgcgt
tacgcgatcgatgccggaaaaattgaacgtgagctgggctggcgtccagaagaaacgttt
gagacgggcatgagaaaaaccgtcagttggtatctgaataacgaaaaatggtggcgcagc
gtgcaggatggttcttataccggtgagcgtttaggactgagcgactaa
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