Pectobacterium versatile: OA04_43250
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Entry
OA04_43250 CDS
T07772
Symbol
trmA
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
pvz
Pectobacterium versatile
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvz03016
]
OA04_43250 (trmA)
Enzymes [BR:
pvz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
OA04_43250 (trmA)
Transfer RNA biogenesis [BR:
pvz03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
OA04_43250 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Cons_hypoth95
Methyltransf_4
MTS
Methyltransf_11
Methyltransf_15
Methyltransf_31
Methyltransf_12
TRM5-TYW2_MTfase
PrmA
DREV
Motif
Other DBs
NCBI-ProteinID:
AVT60769
LinkDB
All DBs
Position
4690114..4691217
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AA seq
367 aa
AA seq
DB search
MTPEILPIEQYDDQLAEKTERLRGMMAPFNAPEPVVFRSPVSHYRMRAEFRIWHEGDELY
HIMFDQQTKQRIRVDRFPAASELINRLMPELLAAIQPDPVLRRKLFQIDYLSTMSGEVIV
SLLYHRALNEEWQEHARALRDSLTAQGFRLQLIGRATKTKICLDRDYVDECLPVAGRDMI
YRQVENSFTQPNAAINIQMLEWALDATAGSTGDLLELYCGNGNFSLALARNFERVLATEI
AKPSVAAAQYNIAANQIENVQIIRMAAEEFTQAMQGVRQFNRLQGIDLTSYQCETIFVDP
PRSGLDDETVKLVQAYPRILYISCNPETLSNNLQTLSETHDIRRLALFDQFPYTHHMECG
VLLEKRQ
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgacgccagaaatcctgcccatcgaacaatacgacgaccagcttgcagagaaaaccgag
cgtctgcgtggaatgatggcacctttcaatgcaccggagcctgtcgtcttccgttctccc
gtcagccactatcggatgcgtgctgaatttcgtatctggcacgagggcgacgagctttac
cacatcatgtttgaccagcaaaccaaacaacgcattcgggtcgatcgctttccggcagcc
agtgaactgatcaaccgcctgatgccggaactgcttgccgccattcagcctgatcccgtt
ctgcgccgtaaattgttccagatagattatctgtcgaccatgagcggcgaagtgattgtt
tcgctgctgtatcaccgcgcactgaacgaggagtggcaggaacatgcccgcgcgctacgc
gatagtctgacggcgcaggggttccgtctacagctgattggccgcgcgacgaaaaccaaa
atctgcctcgatcgcgattatgtcgatgaatgcctgccggttgccgggcgggatatgatt
taccgacaggtggaaaacagcttcacgcagccaaatgctgcaatcaatattcagatgctg
gagtgggcgctggatgcaacagcgggatcaacaggggatttgctggaactgtattgtggt
aacggtaatttttcactcgcgctggcaagaaatttcgaacgcgtgctggcaaccgaaatc
gccaagccatccgtcgcggcggcacaatataatatcgcagcgaatcagatagagaacgtg
cagatcatccgcatggcggcagaagagtttacgcaggccatgcagggcgtgcgccagttt
aaccgcttacagggtatcgatctgacgagctaccagtgcgagaccatttttgttgacccg
ccgcgcagcggactggatgacgaaacggtgaaactggtgcaggcgtatccgcgcattctt
tatatttcctgcaacccggaaacgctgagcaacaacctgcaaacgctatcggaaacccac
gacattcgccgtctggcgctgtttgatcaattcccttacacccatcatatggagtgcggc
gtgctgttggaaaaacgtcagtaa
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