Pectobacterium versatile: OA04_43470
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Entry
OA04_43470 CDS
T07772
Symbol
cytR
Name
(GenBank) DNA-binding transcriptional regulator CytR
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
pvz
Pectobacterium versatile
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvz03000
]
OA04_43470 (cytR)
Transcription factors [BR:
pvz03000
]
Prokaryotic type
Helix-turn-helix
LacI family
OA04_43470 (cytR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
TetR_N
HTH_Crp_2
AIRS
MarR_2
HTH_Tnp_ISL3
HTH_91
Motif
Other DBs
NCBI-ProteinID:
AVT60790
LinkDB
All DBs
Position
4713804..4714847
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AA seq
347 aa
AA seq
DB search
MKQKKGVTTATMKDVADEAGVSTATVSRTLMNPEKVSATTRRKVEQAVIAVGYSPHVLNR
NLKRNESRTILTIVPDICDPYFSEIFRGIEEAAAEHGYLVLIGDCAHQHQKEKTFVDLII
TKQIDGMVLLGSNLPFDAGQEEQRNLPPMVMANEFSPDLALPTVHIDNLTAAFEAVHYLY
QAGHQRIACIAGPEHMHLSQYRLQGYIQALRRNGMLIDNQYIFRGDFTYETGINGLIALM
QHPQPPSAVFCHSDLMALGVLAQARKMGLDIPRDLSVIGFDDIEQAQYSWPPLTSVAQPR
YQIGREAMLLLLEQLQGNTVQSGSRLLSSELVIRDSVAAPNYARNRL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcagaagaaaggcgtcaccacggcgacgatgaaagacgtggcggatgaagcgggt
gtttccaccgcgaccgtatcccgaacgttaatgaacccagagaaagtctctgcgaccacc
cgtaggaaggtcgagcaggctgtcatcgccgttggctattcgcctcacgtactcaacagg
aatctcaagcgtaacgaatcgcgcacgatcctgacgatcgtcccagatatctgcgatcct
tatttctccgaaatatttcgcgggatcgaagaagccgccgccgaacacggctatctggtg
ttgattggtgattgcgctcaccagcatcaaaaagaaaaaaccttcgtcgacctgattatt
accaagcagatcgacggcatggtgttactcggctccaatctgccgtttgacgcaggccag
gaagagcagcgtaatctgccaccgatggtgatggcgaatgagttctcgccggatctggcg
ctgcccaccgtgcatatcgataacctgaccgccgcctttgaagccgtacactatctctat
caggcgggtcatcagcgcatcgcctgcattgccggcccagagcacatgcatctgagccaa
tatcgcctgcagggatacattcaggccctgcgccgcaacgggatgcttatcgataaccag
tatatctttcggggcgatttcacctatgaaaccgggattaacggcctaattgcgctgatg
caacatcctcagccacccagcgcggtcttctgtcacagcgacctcatggcactgggcgtg
ctggcgcaggccagaaagatggggctggacatcccgcgcgatctctccgttatcggtttc
gatgatatcgaacaggcacagtacagctggccgcctctgacttctgtcgctcagcctcgt
tatcagatcggacgcgaggcaatgctgctactcttagagcagttgcaaggtaacacggta
caaagcggttcccgtctgttgtccagtgagctggtcatacgcgacagcgtcgccgcaccg
aattacgcccgtaacaggctttaa
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