Pectobacterium versatile: OA04_44690
Help
Entry
OA04_44690 CDS
T07772
Symbol
rhsA
Name
(GenBank) RhsA deoxyribonuclease, type VI secreted
Organism
pvz
Pectobacterium versatile
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
PAAR_motif
DUF6531
TEN_YD-shell
YwqJ-deaminase
RHS
Motif
Other DBs
NCBI-ProteinID:
AVT60905
LinkDB
All DBs
Position
4857328..4861641
Genome browser
AA seq
1437 aa
AA seq
DB search
MLSDILNRVARVGAMHAGKGPTPPAGRPQPGQGKAPTSPGKTIKHKSFLGALAGAIAGAV
VAAVAFAAAAAVAGAIAVAVVGTGGMGAALVVGAVKLAVGFGAVSLLGGLISSVSSKVSA
MVDSGAPPFGPVSSGSGTVFAEKQKISRAEVDTVACTKHNSPQLIAQGSETVYVNGSPAA
RIDDKTVCGATIKEGASTVFFGSGQQTCLEISDEFSWWEKALLIAVEFLVPPSRGMFKGL
GKLFTRGPTAVLKGMRMGALRTAVGLRRAVRCASKGFKNNKGLARFKEATRGFLKDPVYI
PSGDVIEMRQDIELGQTLPLLFERTYRSAATHTGLLGRGWYDTWSETAQVSRDGLNTHVV
ITLAQGYDIDFTFHQDVQSVFCPLYPAFTLYRRAKGFSLWDRDSLTWREFDVPQGDRLLL
SSIHDPHDNRITLIRDPKGYLRKVRHSDGIELLLVWRGDYLHQIQRIDTGQKTLLAEYRQ
DEQGRLVEADAAHAYHLFYDYDKENRLTRWHDNDQTWARYDYDHQGRCVYTTCADGYLTA
HFEYLDDRVVMTDGLGQCSEFGFNHLHLMSWEKSPLGHVTRYDYDDHGNLLREISPAGRV
VEFTYLDDSGLVSAFTDGSGHAWAYDYDDAQRLCGITDPLGRIWQWAFDEAGNPEKLTGP
DTREVRFTWNRHGLLTQVSDQAGEVQARLRYDHRQRLLSASDALGRTQQLRYDQQDRVVQ
WQRPDGAQYRLGYRRASWKLPEQLIRPDEKEEKRQYDKHNNLLSYVDGNGALWRQSYGPF
DLLTSRTDAQDRTWRYEYDKESQQLVAVVAPDGNRWQWWLDADARVIRERDMAGTDTHYT
YDEDGHCIAIRNGEGETRHFLYDGRGLLIKETAPDDTLHYRYDAAGRLVEVTSATSHVQL
EYDLRDRVVREWLNGTLLTRQFDDTARTVTRTLAREDERDDALTSTFSYSAAGELQQVQL
PDSTELTLVHDAAGREASRSGGAFVQHREYDVMGWLTREMSGQQQDGRLHASQTREYLYD
GAGNLAGVRHNRETRGYRLDATGRVLSVLSGGAGRAVETDEAYRYTRTGLPQDTARLTEW
QAGRLTQHDDTHYQYDKAGRLIRKQVVQPGYRPQVWHYRWDSRNQLRVVDTPTGERWFYR
YDPFGRRTGKRCEQTSEDIRYLWDGDQIADVRHYRNGVLVSRRHWVHNGWELLVQQRQNT
DGRWETDFVTSSQNGEPQALYRPDGTLRWQAPKSTLWGQRQGSTEDPADPGLAFAGQYRD
TESGLCYNRFRYYDPTGGCYVSPDPIGIAGGESNYGYVHNPVSWVDPFGLAGCSKELAQR
KAQELRDSATSNTQRSKLPRATSAVVDKATGKVYYGFSGRPLPNSIHPHLAERMPSPSLE
RWPVQNCAEFKGVNQALLDGARLENLEVHTVKTISGEAFPMCSNCQTTIFGTIVTSG
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgctgagtgatattctgaaccgtgttgcccgcgtgggggccatgcatgcaggcaaaggc
ccgacaccgccggccggtcgtcctcaaccgggccagggaaaagcaccgacatcaccgggc
aaaaccatcaagcacaaaagttttctcggtgcgctggctggggctatcgcaggggcggtt
gtagcagccgtagcctttgccgcagcggctgccgtggcaggtgccattgccgtcgctgtt
gtcgggacgggcggcatgggggcggcgctggtggtgggtgccgtcaaacttgcggtgggg
tttggtgcagtcagcttgctaggggggctaattagcagcgtctccagcaaggtttccgct
atggtagacagcggcgcgccgccgtttgggcccgtttcttctggttcaggtacggtattt
gcggagaagcagaagatttcccgcgctgaagttgacacagtcgcttgtaccaaacacaac
tcgcctcagctgattgcgcaaggaagtgaaaccgtctacgtcaatggctcacccgccgcg
cgtatcgacgataaaaccgtctgtggtgccaccatcaaggaaggggcatccaccgtcttt
tttggctccggtcagcaaacctgtctggagattagtgacgaattcagctggtgggaaaaa
gcgctactgatcgcggtggagtttctggttccgcccagccggggcatgttcaaaggactc
ggcaagctgtttacacgtgggccaaccgcagtgctcaaaggcatgcgcatgggcgcgtta
agaacagcggtggggttacggagagcggttcgctgtgccagcaaaggctttaaaaataac
aaaggtttggcacgctttaaggaagcgacccgcggcttcctgaaagatccggtctacatt
cccagcggggatgtgatcgagatgcgtcaggatattgaactggggcaaacacttcctctg
ctttttgagcgcacttaccgttccgctgccacccatactgggctgctgggacgcggctgg
tatgacacctggagcgaaacggcacaggtcagccgcgacggcctgaatacccacgtcgtc
atcacactggcgcagggatacgatatcgatttcaccttccatcaggatgtgcagtcggta
ttttgtccgctctatcccgcttttactctgtatcggcgggcaaaaggctttagcctatgg
gatcgtgatagcctcacctggcgtgaattcgatgtgcctcagggcgatcggctacttctg
tcttcgatacatgatccgcacgacaaccgcattaccctgatccgcgatccaaaaggctat
ctgcgcaaggtgcgccacagtgatggtatcgagctgctgctggtgtggcgaggagattac
ctacaccagatacagcgtattgatactgggcagaaaaccctgctggctgaataccggcag
gatgaacagggccgactggtcgaggccgatgctgcccatgcctatcatctgttctacgac
tacgacaaagaaaatcgactcacgcgctggcatgacaacgaccagacctgggcgcgctac
gactacgatcatcagggtcgctgcgtctacaccacctgtgccgacggctatctgacagcg
cattttgagtatctcgacgatcgcgtcgtcatgaccgacggattaggtcagtgcagcgaa
tttggcttcaatcacctgcacctgatgagctgggaaaaatccccgttagggcacgtcacc
cgctacgactacgacgaccacggcaacctgctgcgtgagatttccccagcaggccgggtg
gttgagttcacctatctggacgacagcggtctggtgagcgctttcaccgacggcagcggt
catgcctgggcctatgactacgacgacgctcagcggttatgcggtatcaccgacccactg
gggcgcatctggcaatgggcgttcgatgaggctggcaacccagagaagctcacggggccg
gatactcgcgaagtacgatttacctggaaccgccacggcctgctgacgcaggtgagcgat
caggcaggcgaggttcaggcgcggctgcgttacgatcatcgccagcgactgttgagtgcc
agtgatgcgctggggcgcacccagcaactgcgctatgaccagcaggacagagtcgtgcag
tggcaacggccggacggcgcgcaataccggctgggatatcgtcgtgcgagctggaagctg
ccggagcaactgatacgccccgacgagaaagaagaaaaacgccagtacgacaagcataac
aacctgctgagctatgtggacggcaacggggcactgtggcgtcagagctacggccccttt
gacctgctcacctcgcggacggatgcacaagatcgcacctggcgttacgagtacgacaaa
gagagccagcaactggtcgccgttgtcgccccggacggcaaccgctggcaatggtggctg
gatgccgatgcgcgggtcatccgcgagcgggatatggcgggcaccgacacccactacacc
tatgacgaagacggccactgcatcgccatccgtaatggcgaaggcgaaacccgccacttc
ctgtatgacggacgcgggttgctcatcaaagaaaccgcgccggacgatactctgcattat
cgctatgacgccgcaggcaggctagtcgaagtcacctctgctaccagccacgtccaactg
gagtatgacctccgtgaccgggtagtgcgggaatggctgaacggcaccctgctcacccgg
cagtttgatgataccgcacgcaccgtaacgcggacgctagccagagaagatgagcgtgat
gacgcgctgaccagcacgttcagctatagcgcggcgggtgaactgcaacaggtacagttg
ccggacagcacggagctcacccttgtccatgacgccgccgggcgggaagcctcccgttca
ggcggggcgtttgtccagcaccgcgaatatgacgtgatgggctggctgacgcgcgaaatg
agcggtcagcagcaggatggtcgtttgcacgcttcacagactagggaatacctgtatgac
ggagctggcaatctggctggcgttcgccataaccgtgaaacccgaggctatcgtctggac
gccaccggacgggtgctgtccgtcctgagcggtggcgcaggccgtgcggtcgaaaccgac
gaagcctaccgctatacccgaaccggcttgccgcaggataccgcccgactcaccgaatgg
caggcgggcaggctgactcagcacgacgatacacactaccagtacgacaaagccggacgg
ctcatccgtaaacaggtggttcagccgggctaccgcccgcaggtgtggcactaccgctgg
gacagccgtaaccagctccgggttgtcgacaccccgacgggcgaacgctggttctaccgc
tacgacccgttcgggcgacgcactggcaaacgctgtgagcagaccagtgaagacatccgc
tatctgtgggacggcgaccagatagccgacgtgcgtcactaccgcaacggggtgctcgtg
tcgagaagacactgggtacacaacggctgggagctgctggttcagcagcgccagaatacc
gacggacgctgggaaaccgactttgtcaccagcagccagaacggtgaaccgcaggctctg
taccgacccgacggtaccctgcgctggcaggcacccaaaagcaccctctggggtcagcga
caaggctccacggaagaccctgccgacccgggccttgcctttgccggacagtaccgtgac
accgaaagcgggctatgttataaccgttttcggtactacgacccgacgggtggatgctac
gtctcgcctgacccgatagggatagcagggggtgagagtaactatgggtatgtacataac
cctgtcagttgggtcgatccgtttgggttggctgggtgttccaaagagttagcacaaaga
aaagcacaggaacttcgtgatagtgctacatcaaatacacaaagaagtaagttacccaga
gcaacatcggcggtagtcgataaggctacaggtaaagtctattatggattcagtgggcga
cctcttcctaattctattcaccctcatttggcagaaagaatgcctagccctagcttagaa
agatggcctgttcaaaattgtgcagaattcaaaggtgtgaatcaggctttgctggatgga
gcgaggttagaaaatttggaggttcatacggtgaaaactatatcaggcgaagcattccca
atgtgttctaattgtcaaactaccatatttggtacgatagttacgagtgggtaa
DBGET
integrated database retrieval system
