Pectobacterium parmentieri WPP163: Pecwa_0198
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Entry
Pecwa_0198 CDS
T01106
Name
(GenBank) TonB-dependent vitamin B12 receptor
KO
K16092
vitamin B12 transporter
Organism
pwa
Pectobacterium parmentieri WPP163
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pwa02000
]
Pecwa_0198
Transporters [BR:
pwa02000
]
Other transporters
Pores ion channels [TC:
1
]
Pecwa_0198
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF3983
Motif
Other DBs
NCBI-ProteinID:
ACX86053
LinkDB
All DBs
Position
212872..214767
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AA seq
631 aa
AA seq
DB search
MIKKISLLTALSVTAFSGWAQESQNPSSEKNADDIVVTANRFAQPVSSVLASIDVVTRDD
INRWQAKNVLEVMRRLPGVNIAQTGGLGQSASMYIRGSEARHTLVLIDGVPIAKYGITGD
PDFNLIPIALVQRIEFMRGPRSAVYGADAIGGVINIITQTTENKTVLSTGIGSNRYQEYS
GSLHQSVGDSTRVSLAGAYQDTRGFNVYPDSSNQALDSDKDGWRNKTFWAGVEHQFNDSI
SGFFRGYGYGSNSDYDALSQDFGFPIQNEQQSYNHSYSGGLRFSHESYASQLIASYQKYT
SIQYLSTQGRYGAYNSQDDMNQYDVLWGNTLALSHGMVSAGIDWRQQELTSEGVSFNTLN
RESNRYKQDNSGAYLTAQQQYGAVILEGSVRGDDNEKFGRHGTWQLASGWEFSPDYRVTL
SYATGFQAPTLGQLYGQKRFDIESNENLKPEESKQWEAGLEGLTGPLSWRLSGYINKIDN
LIAYEYAFATNTGTYYNVDAATMKGLEWTGSFETGVLNHQITLDYLDARNDENDKVLARR
AKQQAKYQVDWNLYDVDFNLSYQYVGKRFDNAANTRRLPSYSTVDVSASYPVTSHLTVRG
RIANLFDKDYETAYGYRTAGREYYLTGSYTF
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaaaatttcgctgctgacggcgctttccgtcacggcattttctggctgggcg
caggaaagccaaaatccgtcatcggaaaaaaatgccgatgatatcgtggtaaccgcaaac
cgtttcgcccagccggtttcttcggtgttggcatcaattgacgtggtcactcgtgatgat
atcaataggtggcaagcgaagaatgttttggaagttatgcgtcgattgccaggggtgaat
attgctcagactggtgggctggggcaaagcgcatcaatgtatattcgaggctcggaagca
cgccatacgttggtactcattgatggtgtccctattgctaaatacggtattacaggcgat
ccagatttcaaccttatccctattgctttagtacagcgcattgagtttatgcgtggacca
cgttcggcggtatacggcgctgacgctattggtggcgtaattaatatcattacgcaaaca
acagaaaataaaaccgtactcagtactgggattggttcgaatcgctatcaggaatacagt
ggcagtctgcatcagtcggttggtgatagcactcgagtctctttagctggagcttatcag
gatactcggggattcaatgtttacccagattcatctaatcaggcgttagactcagataaa
gatggctggcgcaataaaacattctgggcaggtgttgaacatcagtttaacgattcaatt
tctgggttcttccgtggctacggttatggcagcaacagtgactatgatgcgctttcccaa
gactttggttttcctattcaaaatgaacagcagagctacaatcattcctatagtggcgga
ttacgattctcccatgagagttatgcttctcagttgattgccagctatcagaaatatact
tcaatccaatatctcagtactcaagggcgttatggtgcttataactctcaagatgatatg
aaccaatatgacgtgctgtgggggaataccttggcgctcagccatggtatggtcagcgcg
ggcattgactggcgccagcaggagttaacttcagaaggtgttagttttaatacgctgaat
cgcgagagtaatcgctataagcaggataattcaggggcctatttaaccgcgcaacagcaa
tatggtgctgttattctggaagggtctgtacgcggtgatgacaatgagaaatttggtaga
catggtacttggcagcttgcatcaggctgggaattctcccctgattaccgagtaaccctc
tcctatgcgacaggctttcaggcacctacgttgggacagttgtatgggcagaaacgtttc
gatattgaatcaaatgaaaacctaaagcctgaagagtcgaaacaatgggaagccggattg
gaaggtttaaccggaccattaagttggcgtttgtcgggttatattaataagatcgataat
ctgatcgcgtatgagtatgcttttgcaacaaatactgggacttattataacgttgatgca
gcaacgatgaaggggcttgagtggacgggatcatttgagactggtgtgctgaatcatcaa
atcactttggactatcttgatgcccgtaacgatgaaaatgataaggttttggcccgtcgt
gcgaagcagcaagcaaagtaccaagttgattggaacctgtatgacgtcgattttaatctg
agttaccagtatgtaggtaagcggtttgataatgcagcaaatacccgccgcctacctagc
tacagtacggttgatgtttccgcctcatatccagtcacctcacatctgacagttcgtggt
agaatcgccaacctgtttgataaagattatgagacggcatatggctaccgcacggcaggg
cgagaatactatctcactggaagctataccttctaa
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