Pectobacterium parmentieri WPP163: Pecwa_0807
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Entry
Pecwa_0807 CDS
T01106
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
pwa
Pectobacterium parmentieri WPP163
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwa03021
]
Pecwa_0807
03009 Ribosome biogenesis [BR:
pwa03009
]
Pecwa_0807
Transcription machinery [BR:
pwa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Pecwa_0807
Ribosome biogenesis [BR:
pwa03009
]
Prokaryotic type
rRNA transcription factors
Pecwa_0807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
DUF4332
KH_NusA_C
KH_KhpA-B
FitA-like_RHH
Motif
Other DBs
NCBI-ProteinID:
ACX86626
LinkDB
All DBs
Position
854572..856101
Genome browser
AA seq
509 aa
AA seq
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MNKEILAVVEAVSNEKSLPREKIFEALETALATATKKKYEQEIDVRVSIDRKTGDFDTFR
RWLVVNEVTLPTREITLDAAQFEDPSLDVGGYVEDQIESVTFDRITTQTAKQVIVQKVRE
AERAMVVDQFREQEGEIITGVVKKVNRDNISLEVRPIDGSNTGAEAVIGREDMLPRENFR
PGDRIRGVLYSVRPEARGAQLFVSRSRPEMLVELFRIEVPEIGEEIIEIKAAARDPGSRA
KIAVKTNDKRIDPVGACVGMRGARVQAVSSELGGERIDIILWDDNPAQFVINAMAPADVV
SIVVDEDTCTMDIAVESSNLAQAIGRNGQNVRLASQLLKQHRSDDRWELNVMTVEDLQAK
HQAEAHAAIDVFTKHLDIDEEFATVLVEEGFSSLEELAYVPIKELLAIEGLDEETVEALR
ERAKAALTTLALAHEESLGDGQPAEDLLSLPGLSRELAFKLAAIGVCTLEDLAEQGVDDL
TDIEELNDEQAGELIMAARNICWFGDDNE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagagattctggctgttgttgaagcagtttccaatgagaaatcccttccgcgc
gagaagatttttgaggcgttggaaaccgcactagcgacggcaaccaagaaaaaatacgag
caggaaattgacgttcgcgtcagtatcgatcgtaaaaccggcgattttgatacctttcgt
cgttggttggtggtgaatgaagtcactctgccaactcgtgaaattacgcttgatgctgcg
cagttcgaagatccttctcttgacgttggcggttatgttgaagatcaaatcgaatccgta
acctttgaccgtattactacgcaaacggcaaaacaggttatcgtacagaaagttcgtgaa
gctgaacgtgcgatggttgttgatcagttccgtgagcaagaaggcgaaattatcaccggt
gtcgtgaagaaggtgaaccgtgataatatttcacttgaagtcagaccgattgatggctct
aacactggtgcagaagccgttattggccgtgaagacatgctgcctcgtgaaaatttccgc
cctggcgatcgtattcgtggcgtgctgtactctgtacgtccagaagctcgcggtgctcaa
ctgtttgtcagccgttcccgtccggaaatgctggttgagctcttccgcattgaagtgcca
gaaatcggcgaagaaattatcgaaattaaggcagcggctcgcgatccgggttcacgtgcg
aaaattgcagtgaaaacgaatgacaagcgtatcgatcctgtcggtgcttgtgtcggtatg
cgcggtgcgcgcgtgcaggctgtttccagtgaactgggtggcgagcgtattgatatcatt
ctgtgggatgacaatcctgcacagtttgtgatcaatgccatggcccctgccgatgtggta
tcgatcgtcgttgatgaagatacctgcacgatggatatcgccgttgagtcgagtaatctg
gctcaggcgattggtcgaaacgggcagaacgtccgtctggcttcccaactgttgaaacag
catcgttcagacgatcgttgggaactgaacgtgatgacagtggaagatcttcaagccaag
catcaggccgaagcacatgctgcaatcgacgtctttaccaagcacctggatattgatgaa
gagtttgccactgtgttggttgaagaaggtttctcctcacttgaagaactggcctatgtg
ccaatcaaggaactgctggctatcgaaggccttgatgaagaaaccgttgaagcattgcgt
gagcgagctaaagccgcattaacaacgctggcattggcgcatgaagaaagccttggtgac
ggtcaacctgctgaagacttacttagcttgcctgggctgtcgcgtgagttggcgttcaaa
cttgctgcgatcggtgtttgtacgctggaagatcttgctgaacagggcgttgacgacctg
acagatattgaagagctcaatgatgagcaagcgggcgaattgattatggccgcacgtaat
atctgttggtttggcgacgacaacgaataa
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