Pectobacterium parmentieri WPP163: Pecwa_1027
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Entry
Pecwa_1027 CDS
T01106
Name
(GenBank) transcriptional regulator, AraC family
KO
K10778
AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:
2.1.1.63
]
Organism
pwa
Pectobacterium parmentieri WPP163
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwa03000
]
Pecwa_1027
03400 DNA repair and recombination proteins [BR:
pwa03400
]
Pecwa_1027
Enzymes [BR:
pwa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.63 methylated-DNA---[protein]-cysteine S-methyltransferase
Pecwa_1027
Transcription factors [BR:
pwa03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Pecwa_1027
DNA repair and recombination proteins [BR:
pwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
Pecwa_1027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_binding_1
Ada_Zn_binding
HTH_18
HTH_AraC
Methyltransf_1N
Transposase_20
Axin_b-cat_bind
Motif
Other DBs
NCBI-ProteinID:
ACX86844
LinkDB
All DBs
Position
1110725..1111804
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AA seq
359 aa
AA seq
DB search
MRNDTMLNDTPFQDADSRWQAVVTRNKAADGCFIYAVKTTGIYCSPSCASRQPRRENVVF
FATADEAQAEGFRPCKRCRQGMLSRQEQQTQQIARACRMIEQSDRPPTLAMLAQAVGISA
FHFHRVFKTTTGLTPKQYASAHRHRQLREQLVDNDEVTAAIVAVGYDASGRFYAEAGTHL
GMTPTAFQHKGKGMTIHFAVGCCSLGEILVAESEKGICAILLGDEPEPLLNSLQEMFANA
HLVGGDAAFEQRMAQVVGFVDDPTIGLTLPLDIRGTAFQQRVWQALRAIPTGETLSYSEV
AHWIGTPAAVRAVAGACAANRLAVVIPCHRVVRHDGTLSGYRWGIERKRALLKREQGKE
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaacgacacgatgcttaacgatacgccatttcaggatgctgattcgcgctggcag
gcggtggttacgcgcaataaagcggctgacggttgctttatctatgcggtgaagacgacg
ggaatttactgttctccatcctgtgcatcacgccagcctcggcgtgaaaatgtggtgttc
ttcgcgacggctgatgaagcacaagcggagggtttccgcccgtgtaaacggtgtcgccag
gggatgctttcgcgacaggaacagcagacacagcagattgcccgcgcctgccggatgata
gagcagtcggatcgtccgccgacgctggcgatgttggctcaagccgtcgggataagcgct
ttccattttcatcgcgtgttcaaaaccacaacgggtctgacgccaaaacagtatgccagc
gcccatcgtcaccggcagttacgtgaacaattggtcgataatgatgaggtgaccgcggcg
attgtcgcggtgggctatgatgccagcgggcgtttttatgccgaagctggtacgcattta
gggatgacgccgacggcgtttcagcacaagggaaaggggatgacgatccactttgccgtt
ggctgctgctcacttggtgagattttggtggcggaaagcgagaaagggatctgtgcgatc
ctgctgggagacgaacctgaacctctgctcaactcgcttcaggagatgtttgctaatgcg
catttggtcggtggtgatgcggcgtttgaacaacggatggcgcaggttgtcggatttgtc
gacgatccgaccatcgggctgacgctgccgcttgatattcgcggtacggcattccagcag
cgtgtttggcaagcactgcgggcgatcccgacaggagaaacgctgagctacagtgaagtt
gctcattggattggaacgcccgctgccgtgcgcgctgtcgcgggtgcctgtgcggcgaac
cggctggcggtggtgatcccttgtcatcgtgtggtgcggcatgatgggacgctgtccggc
tatcgctggggtattgagcgtaagcgtgctctattgaagagggaacaggggaaagagtag
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