Pectobacterium parmentieri WPP163: Pecwa_1168
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Entry
Pecwa_1168 CDS
T01106
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa00550
Peptidoglycan biosynthesis
pwa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pecwa_1168
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pwa01003
]
Pecwa_1168
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pwa01011
]
Pecwa_1168
Enzymes [BR:
pwa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Pecwa_1168
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Pecwa_1168
Glycosyltransferases [BR:
pwa01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Pecwa_1168
Peptidoglycan biosynthesis and degradation proteins [BR:
pwa01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Pecwa_1168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
PBP1_TM
Transpeptidase
PBP1b_C
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
ACX86982
LinkDB
All DBs
Position
1260358..1262838
Genome browser
AA seq
826 aa
AA seq
DB search
MSRDDREPIGRKGKAPKRKPERKQAIRRRRDDDYDDDDYDDYQDDYDDDDDYDGDDAMTR
KSQRRRRWLGLAIKLFLIFAVAMAIYGVYLDSQIRSRIEGKVWQLPAAVYGRMVNLEPGM
AYSQKEMISLLEGMQYRQVSRITRPGEFSVRGNSIDMLRRPFDFPDGKEGQIQARLTFAN
DRLSQIQNLDNQRNFGFFRLDPKLITMMQSPNGEQRLFVPRAGFPDLLVDTLVATEDRHF
YEHDGISLYSIGRAFLANITAGRAVQGGSTLTQQLVKNLFLTNERSLWRKANEAYMALIM
DYRYSKDRILELYLNEVYLGQSGNDQIRGFPLASLYYFGRPVNELSLDQQALLVGMVKGA
SLYNPWRNPDITLERRNLVLRLLQNQQVIDADLYNMLSARPLGVQPKGGVISPQPAFMQM
VRQELQQRLGDKVNDLSGVKVFTTLDPVSQDAAEKAVEVGVPALRAGRNVSDLEAAMVIV
DRFSGEVRAMVGGAQTQYAGFNRALQARRPVGSLAKPPTYLAALSQPDTYRLNTLLADEP
LSLKQPNGQLWQPKNYDREFRGRVMLVDALANSLNVPTVNLGMAVGLDQVTATLKRLGIP
ENVIQPVPAMLLGAISLTPMEVAQEYQTIASGGNRAPLSSLRSVIAEDGTVLYQSFPQAE
RAVPAQAAYLTLYGMQQVVERGTSRSLAVKFPNYHLAAKTGTTNDLRDSWFAGIDGKEVA
ISWVGRDNNGPAKLTGANGALTIYRRYLENQTPLPLMLTPPEGITTMTVDASGNFICNGS
SAGRVLPVWTDNPQALCQASQPQPSAQPDQQNGEGVADWIKEMFGQ
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggatgaccgcgaacctatcggacgtaaagggaaagcgccaaaacgtaaacct
gaacgcaagcaggccatacgacgtcgcagggatgacgactatgatgatgatgactatgac
gattatcaggacgactatgacgacgatgatgattacgacggcgatgacgccatgacgcgg
aaatcgcagagaagacggcgctggctggggctggcgatcaaactgttcctgatctttgcc
gtggcgatggcgatctacggtgtatacctcgacagccagatccgcagccgtattgaaggc
aaagtctggcaattacctgctgccgtctatggccgtatggtcaatcttgaacccggcatg
gcctatagtcagaaagagatgattagcctgctggaaggtatgcaataccgtcaggtgagt
cgcattacccgtccgggtgaattcagcgtgcgtggcaacagcatcgatatgctacgccgc
ccgtttgatttccctgatggaaaagaagggcagattcaggcgcgcctgacgtttgccaac
gatcgtttgtcacagatccagaatctggacaaccagcgtaacttcggcttcttccgtctc
gatccgaaactgatcactatgatgcagtcgccgaacggcgaacagcgcctgtttgtgccg
cgtgctggtttccccgatctgttagtggatacgctggtcgcgaccgaagaccgccatttt
tatgaacacgatggcatcagcctgtactcgattggtcgtgcgtttttagcgaacatcacc
gcaggacgcgcagtgcagggcgggagtacgctgacgcagcagttagtgaagaacctgttc
ctgaccaacgaacgttcgctgtggcgtaaagctaacgaagcctatatggcgctgatcatg
gattatcgctacagcaaggatcgtatccttgaactgtatcttaacgaggtgtacctcggt
cagagcggtaatgatcagatccgtggtttcccgcttgccagcctgtattactttggtcgt
ccggtgaatgagctgagtctcgatcagcaggcgctgctggtggggatggtgaaaggggca
tcgctgtacaacccatggcgtaacccagatattacgttagaacgacgcaatttggtgctg
cgactgttgcagaatcagcaggtgattgatgccgatctgtacaacatgctgagtgctcgc
ccgctgggcgtacagccgaaaggcggcgtaatcagtcctcagcccgcgtttatgcagatg
gtacgtcaggagctacaacagcggcttggcgacaaggttaacgatctttccggcgtgaag
gtttttaccacgcttgatccggtctcgcaggatgcggcggaaaaagcggtagaagtgggc
gttccggcactgcgtgcaggccgtaacgtcagcgatctggaagcggcaatggtgattgtc
gatcgtttcagtggcgaagtccgcgcgatggttggcggtgctcaaacgcagtatgccggg
tttaaccgtgcgctacaggcgcgtcgtcctgtcggatcgctggcgaagccgccaacctac
ctggcggcgttgagccagccggacacctatcgtctgaataccttgctggcagatgaacca
ctgtcgctcaagcagcctaatggacaactgtggcagccgaagaactacgatcgtgaattc
cgtggccgcgtcatgttagtcgatgcgctggcaaattcgctgaacgttccgaccgtcaat
ctggggatggccgtagggctggatcaggtcacggcaacgttgaagcgtttaggtatcccc
gaaaacgtgattcagcctgtaccggcgatgctgttgggggcgatcagcctaacaccgatg
gaagtggcgcaggaataccagacgatcgccagtggcggtaatcgtgctccgctttcctca
ctgcgttcggtgattgcggaagatggcacggtgctgtatcagagcttcccgcaggctgaa
cgggcggtgccggcgcaggcggcctatctgacgctatacggcatgcagcaggtggtcgaa
cgtggtacatcgcggtcgctggcagtgaaattcccgaattatcatctggcggcaaaaacc
ggtactactaatgacctgcgcgacagttggtttgccgggattgacggtaaagaagtggcg
attagctgggtggggcgtgataacaacggcccggccaagctgactggagcgaatggagcg
ctgacgatctatcgtcgctatctggaaaaccaaacgccgctgccgttgatgctgacgccg
ccggaaggcattacgacgatgacggtggatgccagcggtaactttatctgtaacggcagc
agcgctggacgcgtcttgccagtctggacggataatccgcaggcactgtgtcaggcgagc
cagccgcagccttccgcgcagccggaccagcaaaacggcgaaggcgtcgctgattggatt
aaagaaatgtttggtcaataa
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