Pectobacterium parmentieri WPP163: Pecwa_1215
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Entry
Pecwa_1215 CDS
T01106
Name
(GenBank) type 1 secretion target domain protein
Organism
pwa
Pectobacterium parmentieri WPP163
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LapA
Big_9
HemolysinCabind
Cadherin_5
Cadherin_4
BapA_N
FecR
Motif
Other DBs
NCBI-ProteinID:
ACX87029
LinkDB
All DBs
Position
1316138..1323766
Genome browser
AA seq
2542 aa
AA seq
DB search
MNGVIGVIKFVIGQVFIVALDGSQRLLVAGDRVYSGEEVVTGANGAVSITLPDGKTLDLG
RDSRWSDVSSASSQTNADTANDIAAIQDAIAQGADPTQVLEAAAAGNDNTGEAGDGGGNH
TAVVLDLTGQIVDPIIGYPTEGINFAINNVNQTDGFNTQALLVTPSSLENNDTITLSSDG
RVVEGGKIIVTATVNNPVTGSDLVITLTNGSTITIPVGETGTSVTIDTRGDDAYRQGDEF
VNIGIDSTSGGSYTSLDTTSTTTTVVGDNNDSTTITLSSANEVTEGGIITVTARVDNPVT
GSPLVIDMGNNVSITIPVGQSSGTVDVATRPDDAYQQGNVPVEFSIVGTSGGNYEALDTT
STTRTTVVDNNDGTKITLEGPDTVTEGEEITIIARVELPPQGSDLVIRLTNGEIVTIPVG
KTEGSVTYAARGDDNLVQGDIPQTVGIETATGGNYENLVNGDPIVTTVQDNDVPVLTVGD
AGTVAEGQPARFEIALSKPVDAATTLTFTVRHGSTDADDIGTPTVTIAGQPVAVTVNADG
SYSVPVAAGTTDGIVVSVPTVDDGVFEGNETFELVGTLTGTTASGTPLPAGIGDTGQATI
SDLNSTDPQTPNPGADVPVLTVGDAGTVAEGQPARFEIALSKPVDAATTLTFTVRHGSTD
ADDIGTPTVTIAGQPVAVTVNADGSYSVPVAAGTTDGIVVSVPTVDDGVFEGNETFELVG
TLTGTTASGTPLPAGIGDTGQATISDLNRGTPDNPSAGADVPVLTVGDAGTVAEGQPARF
EVALSKPVDAATTLTFTVRHGSTDADDIGTPTVTIAGQPVAVTVNADGSYSVPVAAGTTD
GIVVSVPTVDDGVFEGNETFELVGTLTGATASGTPLPAGIGDTGQATISDLNSTDPQTPN
PGADVPVLTVGDAGTVAEGQPARFEIALSKPVDAATTLTFTVRHGSTDADDIGTPTVTIA
GQPVAVTVNADGSYSVPVAAGTTDGIVVSVPTVDDGVFEGNETFELVGTLTGTTASGTPL
PAGIGDTGQATISDLNSTDPQTPNPGADVPVLTVGDAGTVAEGQPARFEVALSKPVDAAT
TLTFTVRHGSTDANDIGTPTVTIAGQPVAVTVNADGSYSVPVAAGTTDGIVVSVPTVDDG
VFEGNETFELVGTLTGATASGTPLPAGIGDTGQATISDLNSTDPQTPNPGADVPVLTVGD
AGTVAEGQPARFEIALSKPVDAATTLTFTVRHGSTDADDIGTPTVTIAGQPVAVAVNADG
SYSVPVAAGTTDGIVVSVPTVDDGVFEGNETFELVGTLTGTTASGTPLPAGIGDTGQATI
SDLNSTDPQTPNPGADVPVLTVGDAGTVAEGQPARFEIALSKPVDAATTLTFTLRHGSTD
ANDIGTPTVTIAGQPVAVTVNADGSYSVPVAAGTTDGIVVSVPTVDDGVFEGNETFELVG
TLTGTTASGTPLPAGIGDTGQATISDLNSTDPQTPNPGADVPVLTVGDAGTVAEGQPARF
EVALSKPVDAATTLTFTLRHGSTDADDIGTPTVTIAGQPVAVTANADGSYSVPVAAGTTD
EIVVSVPTVDDGVFEGNEIFELVGTLTGATASGTPLPAGIGDTGQATISDLNRGTPDNPS
AGADVPVLTVGDAGTVAEGQPARFEIALSKPVDAATTLTFTVRHGSTDANDIGTPTVTIA
GQPVAVTVNADGSYSVPVAAGTTDGIVVSVPTVDDGVFEGNETFELVGTLTGTTASGTPL
PAGIGDTGQATISDLNSTDPQTPNPGADVPVLTVGDAGTVAEGQPARFEIALSKPVDAAT
TLTFTVRHGSTDADDIGTPTVTIAGQPVAVTANADGSYSVPVAAGTTDGIVVSVPTVDDG
VFEGNETFELVGTLTGTTASGTPLPAGIGDTGQATISDLNHAPVTADQSIRTEEDTSVSG
TITASDMDGDTLSYGVGTPPQNGTLALDSTTGKYTYTPAANFSGSDHFTVTVADGNGGTA
TSTVTVGITPVADAPVVSLSSTVGATTPGSAEIIKVNGGSGKSGGFDVQDGKIVKIGSGV
RVWLTEGDTAPTAANSSEQIKYYGKDNGNGNPGGSTSYADIFVVHSKSGYFYRQSDWTEA
QKQYNQLDSVHGNSQSQSSNPGKDYIFVQKEEGFTYKAENSTNNRNNNFNTMDGVKVTYS
DGKGHSGALIKQVSNQLEGVIYSDGSTYTAGNSATVDKVPGQAGKQIYTLDVSAALTDRD
GSEMLSGIRLTGIPTGTVLTDQINNVKYTVGDDGTYLIQNAHNAQTLAGKITLEVPGDGG
KLNVIAQATSTEISNHDTATGYSAEGAEQYGLSVGTAGNDTMSGTYNDDVLFGDVVSFPN
IDGNGITALQNYIGKQLGMQTGVPTTKDMHNYIASHSSEFDLSPAKGGNDILNGGDGDDI
LFGQGGNDTLYGGAGNDLLYGGSGDDILIGGAGGDTLIGGAGADTFKWQAGDIGNDVIKD
FNAKEGDRIDLSDLIGELEQGTDISRYIRITDSQGSPVIEVSTAGNFTADKGGTVAVSIT
LEHYNGALPSLESLVSKPEQPH
NT seq
7629 nt
NT seq
+upstream
nt +downstream
nt
ttgaacggtgtgattggtgttattaaattcgttattgggcaagtttttatcgttgcgctt
gatgggagccagaggctgctcgttgctggcgatcgggtttacagcggtgaagaagtggtg
accggtgctaacggcgcggtttcgatcacattacctgatggcaagacactggatctgggg
cgtgatagccgctggagcgatgtaagtagtgcgtcctctcagacaaatgcggataccgct
aatgatatcgcagctatacaagatgccatcgctcagggcgctgacccaacgcaagtgcta
gaggccgctgctgcgggtaatgataacacaggcgaagcgggtgacggcggtgggaatcac
actgcggtcgtactggatttgaccggacaaatagtggatccaataatcggctacccaacc
gaagggatcaatttcgcaataaataatgtcaatcagacagacggttttaatactcaagca
ttattggttacgccatcctctctggaaaataacgacactattacattgagttcggacgga
cgggttgttgagggcggaaaaattatcgttacggcaacggtaaataacccagtcactggt
agcgatcttgtcataacgttaacaaatgggtcaacgattacgattccagttggggaaacg
ggcacgtccgtgacgatagatacgcgtggtgatgatgcttatcgtcaaggggatgaattt
gtcaatattggtatcgattctacctcaggcggaagttataccagcctagataccactagt
acgacgacgacggtcgttggggataacaatgactcgaccaccatcaccctgagttcggcc
aatgaggtgacggaaggggggattatcacggtgacggccagggtggacaaccctgtgacg
gggagtccgttggtgattgacatggggaataacgtcagcattaccattccggttggtcag
agcagcggcaccgttgatgtggctacgcgcccggacgatgcctatcagcagggcaatgta
ccagtcgagttctcgattgtgggcacctctggaggcaactacgaagcgctggatacgacc
agcaccacccgcaccaccgttgtggacaacaatgacgggaccaagattacattggaaggc
cctgatacagttactgaaggtgaagagatcacgattattgccagggtcgaattaccgcct
caaggtagcgatctggtcattcggttgactaatggggaaattgtcacgattcctgttggt
aagaccgaaggctctgttacctatgctgcacgcggcgatgacaatctggtacagggggat
attccgcaaaccgtagggattgaaacagcaaccggcggcaattacgaaaatcttgtcaat
ggcgatcctattgttactacggtgcaagacaacgatgtaccggtgctgacggtgggggat
gcgggaaccgtggcggaaggccagccggcgcgctttgagattgcgctgagcaagccggtg
gatgcggcgaccacgctgaccttcacggtacgccacggcagtaccgacgcggacgacatc
ggcacgccgacggtcacgatagccgggcagccggtggcggtgacggtgaacgcggacggc
agttacagcgtaccggtggcggccggtactaccgacggcattgtggtgtcggtgccgacc
gtggacgatggggtatttgaaggcaacgagacctttgaactggtgggcacgctgaccggc
accacggcgtcgggcaccccgctgccggccgggatcggtgataccgggcaggcgaccatc
agcgatttgaatagcaccgatccgcaaaccccgaacccgggcgcggatgtgccggtgctg
acggtgggggatgcgggaaccgtggcggaaggccagccggcgcgctttgagattgcgctg
agcaagccggtggatgcggcgaccacgctgaccttcacggtacgccacggctctaccgac
gcggacgacatcggcacgccgacggtcacgatagccgggcagccggtggcggtgacggtc
aacgcggacggcagttacagcgtaccggtggcggccggtactaccgacggcattgtggtg
tcggtgccgaccgtggacgatggggtatttgaaggcaacgagacctttgaactggtgggc
acgctgaccgggaccacggcatcgggcaccccgctgccggccgggatcggtgataccggg
caggcgacgatcagcgatttgaaccgtggcacgccggacaacccgagtgccggcgcggat
gtaccggtgctgacggtcggggatgcgggaaccgtggcggaaggccagccggcgcgcttt
gaagttgcgctgagcaagccggtggatgcggcgaccacgctgaccttcacggtacgccac
ggctctaccgacgcggacgatatcggcacgccgacggtcacgatagccgggcagccggtg
gcggtgacggtgaacgcggacggcagttacagcgtaccggtggcggccggcaccaccgac
gggattgtggtgtcggtgccgaccgtggacgatggggtatttgaaggcaacgagaccttt
gaactggtgggcacgctgaccggcgccacggcgtcgggcaccccgctgccggccgggatc
ggcgacaccgggcaggcgaccatcagcgatttgaatagcaccgatccgcaaaccccgaac
ccgggcgcggatgtgccggtgctgacggtcggggatgcgggaacggtggcagaaggccag
ccggcgcgctttgagattgcgctgagcaagccggtggatgcggcgaccacgctgaccttc
acggtgcgccacggctctaccgacgcggacgatatcggcacgccgacggtcacgatagcc
gggcagccggtggcggtgacggtgaacgcggacggcagttacagcgtaccggtggcggcc
ggcactaccgacggcattgtggtgtcggtgccgaccgtggacgatggggtatttgaaggc
aacgagacctttgaactggtgggcacgctgaccgggaccacggcatcgggcaccccgctg
ccggccgggatcggtgataccgggcaggcgaccatcagcgatttgaatagcaccgatccg
caaaccccgaacccgggcgcggacgtaccggtgctgacggtcggggatgcaggaacggtg
gcggaaggccagccggcgcgctttgaagttgcgctgagcaagccggtggatgcggcgacc
acgctgaccttcacggtgcgccacggctctaccgacgcgaacgatatcggcacgccgacg
gtcacgatagccgggcagccggtggcggtgacggtgaacgcggacggcagttacagcgta
ccggtggcggccggcaccaccgacgggattgtggtgtcggtgccgaccgtggacgatggg
gtatttgaaggcaacgagacctttgaactggtgggcacgctgaccggggccacggcatcg
ggcacgccgctgccggccgggatcggcgacaccgggcaggcgaccatcagcgatttgaat
agcaccgatccgcaaaccccgaacccgggcgcggacgtaccggtgctgacggtgggggat
gcaggaaccgtggcggaaggccagccggcgcgctttgagattgcgctgagcaagccggtg
gatgcggcgaccacgctgaccttcacggtgcgccatggctctaccgacgcggacgacatc
ggcacgccgacggtcacgatagccgggcagccggtggcggtggcggtgaacgcggacggc
agttacagcgtaccggtggcggccggcactaccgacggcattgtggtgtcggtgccgacc
gtggacgatggggtatttgaaggcaacgagacctttgaactggtgggcacgctgaccggg
accacggcatcgggcaccccgctgccggccgggatcggtgataccgggcaggcgaccatc
agcgatttgaatagcaccgatccgcaaaccccgaacccgggcgcggacgtaccggtgctg
acggtcggggatgcaggaacggtggcagaaggccagccggcgcgctttgagattgcgctg
agcaagccggtggatgcggcgaccacgctgaccttcacgctgcgccacggctctaccgac
gcgaacgatatcggcacgccgacggtcacgatagccgggcagccggtggcggtgacggtg
aacgcggacggcagttacagcgtaccggtggcggccggtactaccgacggcattgtggtg
tcggtgccgaccgtggacgatggggtatttgaaggcaacgaaacgtttgaactggtgggc
acgctgaccgggaccacggcatcgggcaccccgctgccggccgggatcggcgacaccggg
caggcgaccatcagcgatttgaatagcaccgatccgcaaaccccgaacccgggcgcggac
gtaccggtgctgacggtcggggatgcgggaaccgtggcggaaggccagccggcgcgcttt
gaagttgcgctgagcaagccggtggatgcggcgaccacgctgaccttcacgctgcgccac
ggctctaccgacgcggacgatatcggcacgccgacggtcacgatagccgggcagccggtg
gcggtgacggcgaacgcggacggcagttacagcgtgccggtggcggccggcaccaccgac
gagatcgtggtgtcggtgccgaccgtggacgatggggtatttgaaggcaacgagatcttt
gaactggtgggcacgctgaccggcgccacggcgtcgggcaccccgctgcctgccgggatc
ggtgataccgggcaggcgaccatcagcgatttgaaccgtggcacgccggacaacccgagc
gccggcgcggatgtaccggtgctgacggtcggggatgcgggaacggtggcagaaggccag
ccggcgcgctttgaaattgcgctgagcaagccggtggatgcggcgaccacgctgaccttc
acggtgcgccacggcagtaccgacgcgaacgacatcggcacgccgacggtcacgatagcc
gggcagccggtggcggtgacggtgaacgcggacggcagttacagcgtaccggtcgcggcc
ggcaccactgatgggatcgtggtgtcggtgccgaccgtggacgatggggtatttgaaggc
aacgagacctttgaactggtgggcacgctgaccggcaccacggcgtcgggcacgccgctg
ccggccgggatcggcgacaccgggcaggcgaccatcagcgatttgaatagcaccgatccg
caaaccccgaacccgggcgcggatgtaccggtgctgacggtgggggatgcgggaacggtg
gcagaaggccagccggcgcgctttgagattgcgctgagcaagccggtggatgcggcgacc
acgctgaccttcacggtgcgccacggcagtaccgacgcggacgatatcggcacgccgacg
gtcacgatagccgggcagccggtggcggtgacggcgaacgcggacggcagttacagcgta
ccggtggcggccggtactaccgacggcattgtggtgtcggtgccgaccgtggacgatggg
gtatttgaaggcaacgaaacctttgaactggtgggcacgctgaccggcaccacggcgtcg
ggcaccccgctgccggccgggatcggtgataccgggcaggcgaccatcagcgatttgaat
catgcaccggtcaccgccgaccagtcgatccgtaccgaggaagatacgtcggtcagtggc
actattacggcaagcgatatggacggtgacacgctgagttacggggtgggtacgccgccg
cagaacggcacgctggcgctggacagcaccactgggaaatacacgtacacgccggctgcc
aactttagcggcagcgaccactttacggtcacggtggcggacggcaacggcggcacggca
accagcacggtgacggtgggcattaccccagtagccgatgcgccagtcgtgagcctgagc
tctaccgtcggtgctacgacgccgggttctgcggaaatcatcaaggtgaacggaggaagt
gggaagtccggtgggtttgatgtacaagatggaaaaattgttaagatcggcagtggcgtg
cgcgtttggttgacagagggcgacactgcgcctactgctgctaactcttctgaacagatt
aagtattacggcaaagataatggcaatggtaatcctgggggatcgacaagctatgctgac
atttttgttgttcattccaaaagcggttatttctaccgccagtctgattggactgaagca
cagaaacagtataaccagcttgattctgtccacgggaatagtcagtcacagtcgagtaac
ccaggtaaagattatatctttgtccaaaaagaagagggctttacctataaggctgaaaat
tcgacgaataatagaaataataacttcaacacaatggatggcgtgaaagttacttattct
gacgggaaggggcattcgggggctttaattaagcaggtaagcaaccagcttgaaggtgtg
atctacagcgatggatcgacatataccgccggaaatagcgcgacagtggacaaagtaccc
ggtcaggcgggaaaacagatctatacgctcgatgtttcagcggcattgaccgatcgtgac
ggtagtgaaatgttgtcagggattcggctgacggggatcccgacgggtacggtgctgact
gaccagatcaacaacgtgaagtataccgtgggtgatgatggtacatacctgattcaaaat
gcgcacaatgcccaaactctggctgggaagattacgcttgaggtgccaggtgatggcggt
aaattgaatgtcatcgcgcaggcgacatcgacagaaattagcaaccacgatacggcaacg
ggctattcggcggaaggcgctgagcagtatggattgagtgtcggtacggcaggtaacgat
acgatgtccggcacgtataatgatgatgttctgttcggcgatgtcgtatcgttcccgaat
atcgatggcaatggtatcactgctttgcagaactacattggtaagcagttaggtatgcaa
acgggtgtgccgaccacgaaggacatgcataactatattgcgtcgcatagctcggagttt
gatctgtcgccagccaaaggagggaatgacatactcaatggcggtgacggggatgacatc
cttttcggtcagggcggcaatgataccctctacggtggtgcagggaatgacttgctctac
ggcggtagcggagacgacatcctgattggcggcgcagggggggatacgcttatcggtggt
gcgggtgcggatacctttaaatggcaggctggtgatattggcaacgatgtgatcaaagac
tttaatgccaaagagggtgaccggatagatctaagtgatttgattggtgagttagagcaa
ggaaccgatatcagtcgctatattcgcatcacagatagccagggttctccggtgattgaa
gtgagcacggcagggaactttacggcagataaaggcggaacggttgcggtgtcgattacg
ttggaacattataacggtgcattaccgtcgcttgaaagtctggtgagtaaacctgaacag
ccccattga
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