Pectobacterium parmentieri WPP163: Pecwa_1444
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Entry
Pecwa_1444 CDS
T01106
Name
(GenBank) fatty acid oxidation complex, alpha subunit FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa00071
Fatty acid degradation
pwa00280
Valine, leucine and isoleucine degradation
pwa00310
Lysine degradation
pwa00362
Benzoate degradation
pwa00380
Tryptophan metabolism
pwa00410
beta-Alanine metabolism
pwa00640
Propanoate metabolism
pwa00650
Butanoate metabolism
pwa00907
Pinene, camphor and geraniol degradation
pwa00930
Caprolactam degradation
pwa01100
Metabolic pathways
pwa01110
Biosynthesis of secondary metabolites
pwa01120
Microbial metabolism in diverse environments
pwa01200
Carbon metabolism
pwa01212
Fatty acid metabolism
Module
pwa_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Pecwa_1444
00650 Butanoate metabolism
Pecwa_1444
09103 Lipid metabolism
00071 Fatty acid degradation
Pecwa_1444
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Pecwa_1444
00310 Lysine degradation
Pecwa_1444
00380 Tryptophan metabolism
Pecwa_1444
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Pecwa_1444
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Pecwa_1444
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Pecwa_1444
00930 Caprolactam degradation
Pecwa_1444
Enzymes [BR:
pwa01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Pecwa_1444
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Pecwa_1444
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Pecwa_1444
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
ACX87243
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All DBs
Position
1565480..1567663
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AA seq
727 aa
AA seq
DB search
MNDQQPFLAATESPSAFSFTIRPDNIGVISIDIPGEKVNTLKREFAEQIISVFELARQHA
TLRGLIFISAKPDSFIAGADITMLNQCSSAEQAENLAKQGQETFDQIAALPFPVVAAIHG
ACLGGGLELALACDYRVCSLDEKTVLGLPEVQLGLLPGSGGTQRLPRLIGLDSALDLILT
GRHLRASQALRQGLVDEAVPHDILLDTAVEILKKGKRKTLPLNWRSRLLSSLGVRHLLFK
MVKRKTRAKTHGNYPATEKIIQVVRRGIEKGREEGYRQEARAFGKLVMTPESAALRHLFF
ASNALKKSAGAASDAKPIHRVGILGGGLMGGGIASVTAMRGQLPVRIKDINEQGINHALK
YNWQLLAKRVERKRMKPTECQRVMTLISGSTDYRGFEHADIVIEAVFEDLALKRQMVAEI
EEHAAPHTIFASNTSSLPIHQIAEGARRPQQVVGLHYFSPVDKMPLVEVIPHAHTSAETV
TTTVALARKQGKIAIVVGDSAGFYVNRILAPYINEAAYCLLEGEPVESIDHALVRFGFPV
GPLALLDEVGIDVATKIVPVLSEALGDRFTSPPAFDAILKDGRKGRKNGKGFYRYSKTHR
FWHAGKEVDSSVYPLLDVTPKAHIDPALISQRAVMMMLNEAARCLDEGVIQCARDGDIGA
VFGIGFPPFLGGPFHYMDRLGMETVVKTLLVLQQQYGDRFAPCERLLAMREGQRTFYPPA
DEDSRAS
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcaacagcctttcctcgcggcaacggaaagcccctctgctttttccttcacc
attcggccggataatatcggtgtgatcagcattgatatccccggtgagaaagtgaacacc
ttaaagcgcgaatttgcagaacagattatctcggtcttcgagttggcgcgacagcatgcg
acgctccgaggactcatttttatttccgccaagcctgattcgtttattgccggagcggat
atcaccatgttgaaccagtgcagcagcgccgaacaggcagaaaatctggcgaaacagggg
caggagacgttcgatcaaattgccgcgctacctttccccgtggtggctgccattcacggt
gcctgtctgggcggtgggttagaactggcattagcctgcgactatcgcgtttgctcgctg
gatgaaaagacggtgctggggcttccagaagtccagcttggccttcttcccggttcgggt
ggaacgcagcgcttgccacgcttgattggtctggatagcgcattggatctcatactgaca
ggtcgccatctccgcgcgagccaggcgctgcggcaagggctggtagatgaggcggtgccg
cacgatatcctgctggatacggcggtcgagatcctcaaaaaaggcaaaaggaagacgctc
ccgttgaactggcgttcgcgtctgctaagcagcctgggtgttcgtcatttgcttttcaaa
atggtgaaacgcaagactcgcgcgaaaacacacggcaactacccagccactgaaaagatt
attcaggtggtgcgacggggaatagaaaaaggccgtgaagaaggatatcggcaggaggcg
cgagcgttcggcaagctggtgatgacgccggagtctgctgcactgcgccatctgtttttc
gcctcgaatgcgttaaagaaaagcgcaggtgcggcctctgacgcaaagccgatccatcgc
gtcggcattctcggcggcggattgatggggggagggatcgccagtgtcacggcgatgcgc
gggcagttgccggtgcgtattaaagatatcaatgagcagggcatcaaccatgcattgaag
tacaactggcaactgctggccaagcgcgtcgagcgtaagcgaatgaaaccgacagagtgc
cagcgtgtgatgacgttgatttccggcagtacggactatcgtggttttgagcatgcggat
atcgtcattgaggcggtcttcgaagatttggcgctgaagcggcaaatggtggcggagatt
gaggagcatgccgcgccgcacacgatttttgcatcaaacacctcatcgttgccgatccat
caaatcgcagaaggcgcgcgacgtccacagcaggttgttggtctgcactattttagcccg
gtagataaaatgccactggttgaggtcattccccatgcacacactagcgcagagacggtc
acgacgacggttgctctggcgagaaagcagggaaaaatagcgattgttgtcggtgatagc
gccggtttttatgtaaaccgcatattggcaccttacatcaacgaagccgcgtactgcctg
ctggaaggggagccggttgaatcgattgaccatgcgctggtgcgttttggtttccctgtc
ggcccgctcgcactgcttgatgaagtcggtattgatgttgcaaccaagatcgtaccagtg
ctgagtgaagcactcggcgatcgctttacctccccgcccgcgtttgatgcgatcctgaaa
gatgggcgcaaagggcgcaagaatggcaaagggttctatcggtacagtaaaacgcatcgc
ttctggcacgcgggaaaagaggtcgatagttcggtttacccgctgctggatgtcacgccg
aaggcgcatatcgatcctgcgttaatcagccagcgtgccgtgatgatgatgttgaatgag
gcggcacgttgtctggatgaaggggtgattcaatgcgcccgtgacggcgatattggcgcg
gtatttggcattggtttcccccctttccttggtggcccattccactatatggatcgcctt
gggatggaaacggtcgtgaaaacgctgctggtgctgcaacaacagtatggcgatcggttc
gcgccctgtgaacgtttactcgcgatgcgggaaggccagcggacgttctatccgccagcc
gatgaagacagccgcgctagttga
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