KEGG   Pectobacterium parmentieri WPP163: Pecwa_1607
Entry
Pecwa_1607        CDS       T01106                                 
Name
(GenBank) type VI secretion system Vgr family protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pwa  Pectobacterium parmentieri WPP163
Pathway
pwa03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pwa00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Pecwa_1607
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pwa02044]
    Pecwa_1607
Secretion system [BR:pwa02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Pecwa_1607
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 Gp5_C Phage_Mu_Gp45
Other DBs
NCBI-ProteinID: ACX87397
LinkDB
Position
1742607..1744457
AA seq 616 aa
MANSTGLQFTVKVGALPESTFAVVDFQLSEALNQPFALSLNLASPLPGVDFGAVLDQPCE
LRVWYEGELKRRVSGIISAFAQGDTGFRRTRYQAEVRPALWRLGLRTNARIFQAQKPEDI
IGALLEESGITDYAFALRHEHAPREYCVQYRESDLAFVTRLAAEEGLYFFHEFEAGKHRV
VFADDAGALSKGPELFFNLATQGLSEGEYVRRFRYAEAVSTAEVALKDYSFKTPAYGLLH
SKVSGELEHQRETYQHFDYPGRFKQDPSGKAFTGYRLDALRAGAMTGSGESNAAMLMPGS
SFTLTEHPNPTLNAAWQLVAITHSGQQPQALEEESGGEPTTYSNSFEVISAKSTWRAGLP
YKPMVDGPQIATVVGPAGEEIYCDEYGRIKLQFPWDRYGASDDQSSCWVRVSQGWAGGQY
GLIAIPRIGHEVIVSFLEGDPDQPIVTGRTFHATNPSPYPLPANKTRTSLRTSTHKGAGF
NELRFEDQAGQEEVFIHAQKDMNTVVLNNRSTTVTADHTENVGGNQTVSVIKDQSTEIQG
QQTIAISGSRSTVVGDVTATEEIHDSLQVKNNILIQSMQGSILIAANIGFISISDEGDIT
IKGKTVTINGNRIDLN
NT seq 1851 nt   +upstreamnt  +downstreamnt
gtggcaaacagtacaggattacagttcacggtaaaggtcggtgccttgcccgaaagcacc
tttgcggtggtggattttcagctcagcgaggccctgaaccagccgtttgccctgtcgctg
aatctggccagcccgttaccgggcgtcgactttggcgcggtactcgatcagccctgtgaa
ctgcgggtgtggtatgagggggaactcaaacgccgggtcagtggcatcatcagcgccttt
gcccagggtgatacgggctttcgtcgtacccgctatcaggcagaggttcgcccggcattg
tggcggctggggctgcgcaccaatgcccgcatttttcaggcacaaaagcccgaggacatt
attggtgcgttgctggaagagtccggtattaccgattacgcctttgcgctgcgtcatgag
cacgcgccccgtgaatactgtgtgcagtatcgggaaagcgatttggcctttgtcacccga
ctggcagcggaagaaggcctgtacttcttccacgagtttgaggctggcaagcaccgggtg
gtctttgcggatgatgccggggcgctcagtaaaggcccggaactgttcttcaaccttgcc
acgcagggtctgagcgaaggcgaatacgtccgccgctttcgctatgccgaagcggtcagc
accgccgaggttgctctcaaggactacagctttaaaaccccggcctacggtctgctgcac
agcaaggtgagcggtgagctggaacaccagcgcgagacctaccagcatttcgactatccg
ggccgcttcaaacaagatccgagcggcaaggcctttactggctatcggctggatgcactg
cgggcgggtgcgatgactggctcgggtgaatccaacgccgcgatgctgatgccgggcagt
agctttaccctgactgaacaccccaatccaacgctcaacgctgcctggcaactggtggcc
atcacgcatagcggacaacagccgcaggcactggaagaagagagcggcggcgaaccgacc
acctacagcaacagtttcgaggtgatcagtgccaaatcaacctggcgtgccggtctgccg
tacaagccgatggtcgatggcccgcaaatcgccactgtcgtcggcccggctggggaggaa
atctactgcgacgaatacgggcgcatcaaactgcaattcccgtgggacagatacggggcc
agcgatgaccagagctcctgctgggtgcgcgtcagccagggctgggccggcggtcagtac
ggcctgattgccatcccgcgtatcggccatgaggtcatcgtcagtttcctggaaggcgac
ccggaccagccgattgtgacgggccgtaccttccatgccaccaatccgtcgccgtaccca
ctgcccgcgaacaagacacgcacctcgctgcgaacttcaacgcataagggagcgggcttc
aatgaactgcgctttgaagaccaggccgggcaggaagaagtgtttatccatgctcagaaa
gacatgaacaccgtggtgctgaacaaccgcagtaccacggtgaccgctgaccataccgaa
aacgttggcggcaatcagacggtgtcggtcatcaaagaccagtccaccgaaatccagggg
cagcaaaccattgccatctccggtagccgcagcacggtggtgggcgatgtcacagcaaca
gaagaaattcacgacagcctgcaggtgaaaaacaacatccttatccaatcgatgcagggc
agcattctgattgccgccaacatcggttttatcagtatcagcgacgaaggtgacatcacc
atcaagggcaaaaccgtcaccatcaacggcaatcgtatcgacctgaactga

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