Pectobacterium parmentieri WPP163: Pecwa_1777
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Entry
Pecwa_1777 CDS
T01106
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01732
pectin lyase [EC:
4.2.2.10
]
Organism
pwa
Pectobacterium parmentieri WPP163
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Pecwa_1777
Enzymes [BR:
pwa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.10 pectin lyase
Pecwa_1777
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ACX87563
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Position
1925662..1926606
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AA seq
314 aa
AA seq
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MAYPTTNITGIIGFAKAANVTGGTGGKVVTVNSLADFKSAVSGSAKTIVVLGASLKASAL
TKVVFGSNKTIVGSFGGANVLTNIHLRADSNSANVVFQNLVFKHDVSIKDNDDIQLYLNY
GKGYWVDHCSWPGHTWSDSDGSLDKLIYIGEKADYVTISNCLFSNHKYGCIFGHPADDNN
SAYNGYPRLTICHNYYENIQVRAPGLMRYGYFHVFNNYVNKFNLAFTVAQNANVLSERNV
FGTGAEKKGMVDDKGNGSTFTDNGSSPAAVASKSPAAKWTASSNYSYSLMTTAAAKSWVV
SNAGAQNSALKFPS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcttatccaacaacaaatattactgggattattggttttgcaaaagcggcgaatgtc
accggaggaacgggtggtaaagttgtgacggtaaattctttggctgattttaaatcagcc
gtgagtggttccgcaaaaaccatcgtagtgctgggcgcatcgttgaaagcatcagcattg
accaaggttgtatttggcagtaataaaaccattgtcggttcttttggcggagctaatgta
ctgaccaatattcacctgcgtgctgacagcaattccgctaacgtcgttttccagaatctg
gtttttaaacatgatgtctctatcaaggacaatgatgatatccaactgtatttgaattac
ggtaaaggctattgggtggatcactgttcatggccggggcatacgtggagtgatagtgat
ggtagtcttgataaactgatttatatcggtgagaaagcagactacgtcacgatcagtaac
tgcttattctcaaaccataaatacggttgtattttcggccacccggcagatgacaataat
agtgcctacaatggttatccacgtttaaccatctgccataactattacgaaaacattcag
gttcgtgcacccggcctgatgcgttatggttattttcatgtcttcaacaactacgtcaat
aagtttaatctggcctttacggtcgcgcagaatgccaatgtgctttctgaacgcaacgta
tttggcactggtgcagaaaagaaaggcatggttgatgataagggcaatggttcaaccttt
acggataatggcagttcaccggcagcggtagcgagcaaatcgcctgctgctaaatggacg
gcgtcatctaactattcatacagtttgatgactactgcggcggctaaatcctgggtggtt
tctaatgcgggagcacaaaatagcgcgctcaagtttccatcataa
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