Pectobacterium parmentieri WPP163: Pecwa_1944
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Entry
Pecwa_1944 CDS
T01106
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pwa
Pectobacterium parmentieri WPP163
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pwa03009
]
Pecwa_1944
Enzymes [BR:
pwa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Pecwa_1944
Ribosome biogenesis [BR:
pwa03009
]
Prokaryotic type
ribosomal protein modification factors
Pecwa_1944
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
ACX87724
LinkDB
All DBs
Position
complement(2111422..2112735)
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AA seq
437 aa
AA seq
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MQQPRIGFVSLGCPKNLVDSERILTELRTEGYQVVPRYDDAELVIVNTCGFIDSAVQESL
EAIGEALNENGKVIVTGCLGAKENQIREVHPKVLEITGPHSYEQVLSHVHQHVPKPTHNP
FTSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGSVLDEAKRLVDA
GVKELLVISQDTSAYGADVKQRTGFWNGQPVKTSMASLCEQLASLGVWVRLHYVYPYPHV
DDVIPLMAEGKILPYLDIPLQHASPKILKLMKRPGAVERTLERIKRWREICPDLTLRSTF
IVGFPGETEEDFQMLLDFLQEAKLDRVGCFKFSPVEGASANALPDQVPEEVKEERFHRFM
QLQQAISTQRLQDKIGREVLVLIDEIDEEGAIGRSMADAPEIDGAVYLNGETGVKVGDIV
KVKIEHADEYDLWGSRV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaccccgtatcggctttgtttccctcggctgcccgaaaaacctcgtcgactcc
gagaggattctgaccgaactgcgtactgaaggttatcaggtcgtgccacgttatgacgac
gctgaactggtgatcgtcaatacctgtggttttattgacagcgccgtacaagagtcgctg
gaagccatcggcgaagcgctgaatgagaacggtaaagttatcgtaacgggctgtctgggt
gccaaagaaaatcaaatacgcgaagtgcaccccaaagttctggaaattactggcccacac
agctacgagcaggtgctgtcgcacgtacatcaacacgtccccaaaccaacgcacaacccg
tttaccagcctggtccccgagcagggcgtaaaactcacgccgcgccattacgcgtatctg
aaaatttcagaaggttgtaaccaccgctgcacgttctgcatcattccttccatgcgtggc
gatttggatagccgtccgatcggctcggtgctggatgaagcgaagcgtctggtcgatgct
ggcgtaaaagagctgctggtgatctctcaggacacctcggcttacggtgcggatgtgaag
cagcgaaccggcttttggaacgggcagccggtcaaaaccagcatggccagcctgtgtgaa
caactggcgtcgctgggcgtgtgggtgcgtctgcactatgtctacccttatccgcacgta
gacgatgtgatcccattaatggcggaaggcaaaattctgccgtatctggatattccgctc
cagcacgccagcccgaagatcctcaaactgatgaagcgccccggcgcagtagaaagaacg
ctggagcgcattaagcgctggcgcgaaatctgcccggacttaacgctgcgttcaaccttt
attgtcggcttccccggcgagacggaagaagactttcagatgctgctcgatttcctacag
gaagccaaactcgaccgcgtaggctgtttcaaattcagtcctgtcgaaggtgcatcggca
aatgcgttgcccgatcaggtgccggaagaggttaaagaagaacgcttccaccgcttcatg
caattgcagcaggcgatctctacccagcgtttgcaggataaaattggccgagaagtgctg
gtgctgatcgatgaaatcgacgaagaaggcgcgattggccgcagtatggctgacgccccc
gaaattgacggcgcggtttatctgaacggcgaaacgggcgttaaggtcggtgatatcgtc
aaagtgaaaatcgagcacgcagacgaatacgatctatggggtagccgcgtttaa
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