Pectobacterium parmentieri WPP163: Pecwa_2196
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Entry
Pecwa_2196 CDS
T01106
Name
(GenBank) Oligogalacturonate-specific porin
KO
K22110
oligogalacturonate-specific porin family protein
Organism
pwa
Pectobacterium parmentieri WPP163
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pwa02000
]
Pecwa_2196
Transporters [BR:
pwa02000
]
Other transporters
Pores ion channels [TC:
1
]
Pecwa_2196
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KdgM
Porin_4
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
ACX87966
LinkDB
All DBs
Position
complement(2387812..2388534)
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AA seq
240 aa
AA seq
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MKVKLLALAVTSLISVSTMAVTIDYRHEMKDTPKNDHRDRLSISHRFDNGFGLSAEAKWR
QASNDNTPNKPYNETVSNGTEVVASYVYKINKTFQVEPGFSLDSNSTSNNYRPYLRGRAA
VTDDFSVSFRYRPYYLRNSGLRVGQSNNDPSVEKGYNLTTVLSYKFLKDFQVDYELDYKK
ATKAGKKLYDNENYDFTHDVKLAYKWDKNWKPYMAVGNVADSGTNDHRQTRYRVGVQYSF
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaaattattagctctggctgtcacgtcattgattagcgtaagcacaatggct
gtgacaattgattatcgtcatgaaatgaaagatactccgaaaaacgatcaccgcgatcgt
ctgtcaatatctcaccgttttgataatggctttggtctttctgccgaagcgaaatggcgt
caagcaagtaatgataatacccctaacaagccttacaatgaaactgtaagtaatggcact
gaagtcgttgctagctatgtgtataaaatcaataaaacttttcaagttgaacctggtttt
tctttagattcaaactctacttctaacaattaccgcccttatctacgtggccgtgcggct
gttactgatgatttttctgtttctttccgctatcgtccatactatttaagaaacagcggg
cttagagttggtcagagtaacaatgatccttccgttgaaaaaggttataatttaacaacc
gtattaagctataaattcctgaaagatttccaggttgattatgagttggattataaaaaa
gccactaaagctgggaaaaaactttacgataacgaaaactatgacttcactcatgatgtg
aaactggcttataagtgggataaaaactggaaaccttatatggcggtaggtaacgttgca
gattccggtactaacgatcatcgtcaaactcgttaccgtgttggtgtacaatatagcttc
taa
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