KEGG   Pectobacterium parmentieri WPP163: Pecwa_2447
Entry
Pecwa_2447        CDS       T01106                                 
Name
(GenBank) type VI secretion system Vgr family protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pwa  Pectobacterium parmentieri WPP163
Pathway
pwa03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pwa00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Pecwa_2447
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pwa02044]
    Pecwa_2447
Secretion system [BR:pwa02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Pecwa_2447
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 Gp44-like_2nd bCoV_SUD_C
Other DBs
NCBI-ProteinID: ACX88208
LinkDB
Position
complement(2647919..2650126)
AA seq 735 aa
MFSRITAQLPMDGLLFWKLSGTETLSHSFVLTADLLATDARIDRHSLLGQPVTFTLPTQS
LLSPRYLNGKITRVAVRSEELSGTRYAVYTLTVESDLWPMRRDRNLRIFQSQTVPQIVQT
LLKEYGVNVEMRLSGSYRVWEYCVQYQESSLDFLSRLMELEGIYYWFRHEQERHTLVLCD
ATDQHKAFPGYETMTYHVTPSGGSVTEEGISQWSLAESVTPGMYSTDDYDFRKPNAWMLQ
ARQNPASPTPGSVDVYDWPGHFVDHSHGEFYTRIRQEVWQVEHHSVSGSGTVTGIAPGFT
FGLLNAPHFSDNGEYLVTSATYVFEENSYASGDSGGSKHNIAFTVLPASVTFRAEPTTAW
PKTHGPQTAKVVGPQGESIWTDRYGRVKVKFHWDRLAKGDDTSSCWVRVSSAWAGQGFGG
VQIPRVGDEVVVDFINGDPDRPLIIGRVYNEASMPPWNLPEDATRMGFMSRSKDGHHDNS
SFLFFEDKSGDELLNMHAEKDMSISVENDKTIAIEGCRTTTIGKEQSDKVTGDATFHYKQ
KRTTTVDDAEINTFNNGEFTTIKNGRTLKITSGGDEISINGDKKTRIKGDEKRELSGSLN
EGVEGDVVVNINGNWDQTVVSGKINIFSPNEICIKSGKKVSIEAPSSWVKTALHSFSMTG
FNESVTGNSVSFTGNSISGAGVSSSFTTVSNSLTALSNSSALVSYSIKTIDNRRSITKIE
DSLQNLVISAIHLFI
NT seq 2208 nt   +upstreamnt  +downstreamnt
atgttctcacgcatcaccgcgcagttgccgatggacggcctgctgttctggaaactctcg
ggcaccgagacgttgtcccactcatttgtgctgaccgccgacctgcttgccaccgacgca
cggattgaccgacattcgctgctgggccagccggtcacgttcacactgccgacgcagagc
ctgctgagcccgcgctacctcaacggcaaaatcactcgggtcgcggtgcgcagcgaagag
ctgagcggcacgcgctacgcggtctacacgctgacggtggaatcggacctgtggccgatg
cggcgtgaccgcaatctgcgcatcttccagagtcagacggtgccgcagatagtgcagacg
ctgctgaaagagtacggggtgaatgtggagatgcgtttatcgggcagctaccgggtgtgg
gagtactgcgtgcagtatcaggagagcagcctggatttcctcagccgactgatggagttg
gaggggatttactactggttccgccacgagcaggagcgccacacgctggtgctgtgcgac
gcgacagaccagcacaaggcatttcccggctacgagacgatgacatatcacgtgacgccg
tcgggtggcagcgtgacggaagagggcatcagccagtggtcgctggcagagagcgtcacg
ccgggaatgtacagcacggacgattacgattttcgcaagccaaacgcgtggatgcttcag
gcgcggcagaatccggcgtcgccgacgccgggctcggtggacgtgtacgactggccgggt
cattttgtggaccacagccacggcgagttttacacgcgtatccgtcaggaggtgtggcag
gtagagcaccacagcgtgagtgggtcgggtacggtgacgggcattgcaccggggtttacc
tttggtctccttaacgcgccgcattttagcgacaacggtgagtatctggtgacatcggcg
acgtatgtgtttgaggaaaacagctacgccagcggtgatagcggaggctcgaagcacaac
attgcgttcacggtgctgcccgcgtcggtaacgttccgggcggagccgacgacggcgtgg
ccgaagacgcacggcccgcagacggcgaaggtggtgggcccgcagggagagtctatctgg
acggaccggtacggccgggtgaaggtaaagttccactgggatcgactggcgaagggcgac
gacaccagctcgtgctgggtacgtgtatcgagcgcctgggcgggtcagggatttggcggg
gtgcagatcccgcgcgtgggcgatgaagtagtggtggacttcatcaacggcgacccggac
cgcccgctgatcatcggccgggtgtacaacgaggcgagcatgccgccgtggaatctcccc
gaggatgcgacacgtatgggttttatgagccgcagcaaagacgggcatcatgacaactcc
agcttcctgttttttgaggataagtcgggggatgaactgctcaatatgcatgctgagaag
gacatgagcatctcagtggagaatgacaagaccatcgccattgaaggttgtcgcacgacc
actatcggcaaagaacagagcgataaagtaaccggtgatgccacattccattacaagcaa
aagcggacgacaacggttgatgatgctgagattaatacatttaataatggtgaatttaca
actataaaaaatggacgtactttaaaaataacaagcggtggagacgaaatatcaattaat
ggtgataaaaaaactcgaattaaaggtgatgaaaaacgtgaactttcaggtagtttaaac
gagggagttgaaggtgacgttgttgttaacattaatggtaactgggatcagaccgtcgtg
tcgggaaaaattaatatttttagccctaatgagatttgtattaagagtggtaaaaaagta
agcatagaagcgccttcgagttgggtgaaaactgcgcttcattctttttcaatgactgga
tttaatgaaagtgttactggaaatagtgtttcatttactggaaatagtatcagtggggca
ggagtaagttcttcgttcaccacagtcagtaatagccttaccgccttaagtaactcaagt
gcgttggttagttattcgataaaaaccattgataatagacgctcaatcactaaaattgaa
gactctcttcaaaatttagttattagtgcaatacatttatttatatga

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