Pectobacterium parmentieri WPP163: Pecwa_2511
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Entry
Pecwa_2511 CDS
T01106
Name
(GenBank) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa00040
Pentose and glucuronate interconversions
pwa01100
Metabolic pathways
pwa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Pecwa_2511
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pecwa_2511
Enzymes [BR:
pwa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Pecwa_2511
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GFIT
Motif
Pfam:
Pectate_lyase_2
Motif
Other DBs
NCBI-ProteinID:
ACX88272
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Position
2723237..2724943
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AA seq
568 aa
AA seq
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MKRFALSLLAGLVALQASAATPDRLTTVNQYVDNVLAKAGDHYHGQSPTPLLADGVDPRT
GKQMEWIFPDGRQAVLSNFSAQQNLMRVLVGLSNLSGNPSYKQRAEAIVKYHFQHYQDES
GLLIWGGHRFVDLKTLQPEGPSEKEMVHELKNAYPYYDLMFSVDKEATARFIRGFWNAHV
YDWKIMETSRHGKYGQKIGALWQSPFEQQPPFFATKGLSFLNAGNDLIYSASLLYKYNKE
DGALIWAKRLAQQYVLPRDKATGLGVYQFTQALKRDETTDDADTHSKYGDRAQRQFGPEF
GPTALEGNMMLKGRTSTIYSENALMQLQLGKDLGAEGKELLTWTTDGLKAFAKYAYNESD
NTFRPMLANGKDLSNYVLPRDGYYGKKGTVLKPYPADNSFLLSYARAYTVSPDTELWRVA
RGIARAQGLGELGSAPGKDVKVDLATKNSDPYALFALLDLYQASKVKDYLSLAEKVGDNI
ISTRYKNGFFMAEPNRQYADVDTIEPYALLALEAAIRNQPQSVAPFLNGAGFTEGGYRME
DGSTRVSTRDNELFLLNVGETLKPNNKK
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatttgctctgtcgctccttgctggtctggtcgctttacaggccagcgccgcc
acaccagaccgtctcaccaccgtcaatcagtatgttgacaacgtgctagcgaaagcgggt
gaccattatcacggtcaatcgcccacgccactgcttgctgacggtgtcgatcctcgcact
ggcaaacagatggagtggatcttccctgatggtcgtcaggccgtgctgtccaacttctcc
gctcagcagaacctaatgcgcgtgctggtcgggctcagtaatctgagcggtaatcccagc
tataagcagcgtgctgaagcgatagtgaaatatcacttccaacattatcaggatgagagc
ggcctgctgatttggggcggccaccgtttcgttgatttaaaaacgctgcaaccggaaggc
cccagtgaaaaagagatggtgcatgagttgaaaaatgcctatccctactacgatttgatg
ttcagcgtcgataaagaggcgaccgcgcgctttattcgcggcttctggaatgcgcacgtt
tatgactggaagatcatggaaaccagccgtcacggtaaatacgggcaaaaaataggcgca
ctctggcaaagcccgtttgagcaacagccgcccttcttcgcgaccaagggtcttagcttc
ctgaatgccggtaacgatctgatctattccgcttccttactgtataaatacaataaagaa
gatggcgcactgatctgggcaaaacgtctggcgcagcagtatgtgctaccacgggataaa
gcaaccggacttggcgtgtatcagtttacgcaggcgctgaagcgcgatgaaaccaccgat
gatgccgatacgcattccaaatacggcgatcgcgcccagcgtcaatttggcccagagttc
ggcccaacggcgctggaaggcaatatgatgctgaaaggacgcaccagcacaatctattcc
gaaaatgcgctcatgcaactccaactgggtaaagatttaggcgcggaaggcaaagaatta
ctgacgtggacaaccgatggcctcaaggcctttgctaaatatgcctacaacgagtccgat
aacaccttccgtccgatgctcgctaacggcaaagatctctccaactacgtcctaccgcgt
gacggttactacggtaaaaaaggcaccgtgctcaaaccttatcctgcggataactcattc
ttgctctcgtatgctcgcgcctacaccgtttcaccggataccgagctgtggcgtgttgca
cgcggcatcgctcgcgcccaagggttgggtgaattaggttcagcaccgggcaaggacgtc
aaagtagatctcgcaacaaagaacagtgatccttatgccctgtttgcgctgctggatctg
tatcaggctagcaaagtgaaggactatttgtcgctggcggaaaaagtgggcgataacatt
atcagtacgcgttataaaaacggcttcttcatggccgagcccaacaggcaatatgctgat
gtcgacaccatcgagccttacgcgctgttagcgttggaagccgcgatacgtaatcaaccg
cagtccgttgctccgttcctgaatggtgcaggcttcaccgaaggcggttaccgcatggaa
gatggttcaacccgcgtgtctacgcgcgataacgaactcttcctgctaaatgttggtgag
acattaaagccaaacaacaagaaataa
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