KEGG   Pectobacterium parmentieri WPP163: Pecwa_2692
Entry
Pecwa_2692        CDS       T01106                                 
Name
(GenBank) putative sigma54 specific transcriptional regulator
  KO
K11908  sigma-54 dependent transcriptional regulator
Organism
pwa  Pectobacterium parmentieri WPP163
Brite
KEGG Orthology (KO) [BR:pwa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pwa03000]
    Pecwa_2692
Transcription factors [BR:pwa03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    Pecwa_2692
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 AAA_5 Mg_chelatase AAA_16 AAA HTH_8 AAA_2 AAA_assoc_2
Other DBs
NCBI-ProteinID: ACX88447
LinkDB
Position
complement(2945154..2946752)
AA seq 532 aa
MYECKGLPKGEQRSKSDEGPGQISLLDLALTLTAQNTEAELCDWLLSTVASHLRPRGTIL
GLVDHSGRQLLCQGRVAGEPVMMALDVDDFSHPLAYALHENKAHAWSSLNGGARIDHLAF
QQMLSGLETACGLYAIPALSDSGTVLGTLALLDTPERLQQWHDSGEARKLVQIFCNQLVL
LRQRSGGLHQQSMLSASVKRARDEVCQQVLIKRIQDTLIGQSPGMRALQQKVWQAAEHTL
SVLILGETGTGKDVVARLLHQCSGRAGAPFVAINCAAIPENLIESELFGYQKGAFSDALS
DKVGLVAQAHGGTLFLDEIGDMPLAMQAKLLRVLETKCFRPLGAEQEVHSDFRLIAATHH
SLTKRISDGAFRQDLYHRLCQCVLHVAPLRERVEDIPLLCRHFIALCCRREQKVPVTLEQ
SFLRQLMQYAFPGNVRELRNLLEVACAHTSSGQQITMQSLPPEAQKRLASDQVQGEDFQH
IADLRLAVCLREATVLQARLRQFGGDRQAAADSLNIPKRTFNRKCLRLGIRY
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgtatgaatgcaaaggattgccgaagggggaacagaggagcaaaagcgatgaagggccg
gggcagatatccctgcttgatctggcattgactctgactgcacagaacactgaggctgaa
ctgtgtgactggcttttgtccacggtggcgtctcacttacggccccgtggtacgatactt
gggctggttgatcacagcggtaggcaactcttgtgtcaaggtcgggtggctggtgaaccc
gttatgatggcacttgatgtggatgatttcagtcacccattggcatatgccctgcatgag
aacaaggcacacgcttggtcgtcgttgaatggtggtgcgcgtattgatcacctggctttt
cagcaaatgctatcgggcttggaaacagcatgtgggctgtatgccataccggcgttatcg
gatagcggcaccgtgttgggaacactggcgctgctggatacaccagagcgtttacaacaa
tggcacgacagtggagaagccagaaagttggttcagatattctgcaaccaactggtgctt
ttgcgccagcgatcgggagggctgcatcagcagtcaatgctcagtgcttctgtcaaacga
gctcgggatgaggtgtgtcagcaggtactgataaaacgtatacaggataccctgatcggc
cagtcgccaggcatgagggcgttacaacaaaaggtctggcaggcggctgagcatactttg
tcagtattgatcctgggtgaaacgggtacaggcaaggatgtggtggcccgtctgctgcat
caatgctctggcagggcaggtgcgccctttgtggcgattaactgtgccgcgatccccgag
aatctgatcgaaagtgagttgtttggctaccagaaaggggcgttttctgatgctctgagc
gacaaggttggtctggtggcgcaggcccatggcggcacgctgtttctggacgagatcgga
gatatgccgcttgccatgcaggccaagttattgcgggtgctggagaccaagtgttttcgc
cctctcggcgcagagcaggaggtgcattcggatttccggctaattgccgccacgcatcat
tcgttgacaaagcgcatatcagacggtgcgtttcgccaggatctgtaccatcgactatgc
cagtgtgtattgcatgtagcgccactgcgcgaacgtgtagaggatattccgctgctgtgc
cgtcacttcatcgcactctgttgcagacgggagcagaaagtacccgtgacgctggagcag
tcattcctgcgtcagttaatgcagtatgcctttcctggcaacgtgcgggaactgcgcaac
ttgctggaggttgcttgtgctcatacctcatctggccagcagatcaccatgcagtcactg
ccgcccgaggcgcagaaacggctggcaagtgaccaggttcagggagaggatttccaacac
atagcggatttacgccttgcggtgtgtttacgtgaggccaccgtcctgcaagcgaggctt
cgacagttcggtggggatcgtcaagctgccgcagacagtctgaatatacccaagcgtacg
ttcaatcgtaaatgtctcaggttggggatcaggtattga

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