Pectobacterium parmentieri WPP163: Pecwa_2692
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Entry
Pecwa_2692 CDS
T01106
Name
(GenBank) putative sigma54 specific transcriptional regulator
KO
K11908
sigma-54 dependent transcriptional regulator
Organism
pwa
Pectobacterium parmentieri WPP163
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwa03000
]
Pecwa_2692
Transcription factors [BR:
pwa03000
]
Prokaryotic type
Helix-turn-helix
Other families
Pecwa_2692
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA_16
AAA
HTH_8
AAA_2
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
ACX88447
LinkDB
All DBs
Position
complement(2945154..2946752)
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AA seq
532 aa
AA seq
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MYECKGLPKGEQRSKSDEGPGQISLLDLALTLTAQNTEAELCDWLLSTVASHLRPRGTIL
GLVDHSGRQLLCQGRVAGEPVMMALDVDDFSHPLAYALHENKAHAWSSLNGGARIDHLAF
QQMLSGLETACGLYAIPALSDSGTVLGTLALLDTPERLQQWHDSGEARKLVQIFCNQLVL
LRQRSGGLHQQSMLSASVKRARDEVCQQVLIKRIQDTLIGQSPGMRALQQKVWQAAEHTL
SVLILGETGTGKDVVARLLHQCSGRAGAPFVAINCAAIPENLIESELFGYQKGAFSDALS
DKVGLVAQAHGGTLFLDEIGDMPLAMQAKLLRVLETKCFRPLGAEQEVHSDFRLIAATHH
SLTKRISDGAFRQDLYHRLCQCVLHVAPLRERVEDIPLLCRHFIALCCRREQKVPVTLEQ
SFLRQLMQYAFPGNVRELRNLLEVACAHTSSGQQITMQSLPPEAQKRLASDQVQGEDFQH
IADLRLAVCLREATVLQARLRQFGGDRQAAADSLNIPKRTFNRKCLRLGIRY
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaatgcaaaggattgccgaagggggaacagaggagcaaaagcgatgaagggccg
gggcagatatccctgcttgatctggcattgactctgactgcacagaacactgaggctgaa
ctgtgtgactggcttttgtccacggtggcgtctcacttacggccccgtggtacgatactt
gggctggttgatcacagcggtaggcaactcttgtgtcaaggtcgggtggctggtgaaccc
gttatgatggcacttgatgtggatgatttcagtcacccattggcatatgccctgcatgag
aacaaggcacacgcttggtcgtcgttgaatggtggtgcgcgtattgatcacctggctttt
cagcaaatgctatcgggcttggaaacagcatgtgggctgtatgccataccggcgttatcg
gatagcggcaccgtgttgggaacactggcgctgctggatacaccagagcgtttacaacaa
tggcacgacagtggagaagccagaaagttggttcagatattctgcaaccaactggtgctt
ttgcgccagcgatcgggagggctgcatcagcagtcaatgctcagtgcttctgtcaaacga
gctcgggatgaggtgtgtcagcaggtactgataaaacgtatacaggataccctgatcggc
cagtcgccaggcatgagggcgttacaacaaaaggtctggcaggcggctgagcatactttg
tcagtattgatcctgggtgaaacgggtacaggcaaggatgtggtggcccgtctgctgcat
caatgctctggcagggcaggtgcgccctttgtggcgattaactgtgccgcgatccccgag
aatctgatcgaaagtgagttgtttggctaccagaaaggggcgttttctgatgctctgagc
gacaaggttggtctggtggcgcaggcccatggcggcacgctgtttctggacgagatcgga
gatatgccgcttgccatgcaggccaagttattgcgggtgctggagaccaagtgttttcgc
cctctcggcgcagagcaggaggtgcattcggatttccggctaattgccgccacgcatcat
tcgttgacaaagcgcatatcagacggtgcgtttcgccaggatctgtaccatcgactatgc
cagtgtgtattgcatgtagcgccactgcgcgaacgtgtagaggatattccgctgctgtgc
cgtcacttcatcgcactctgttgcagacgggagcagaaagtacccgtgacgctggagcag
tcattcctgcgtcagttaatgcagtatgcctttcctggcaacgtgcgggaactgcgcaac
ttgctggaggttgcttgtgctcatacctcatctggccagcagatcaccatgcagtcactg
ccgcccgaggcgcagaaacggctggcaagtgaccaggttcagggagaggatttccaacac
atagcggatttacgccttgcggtgtgtttacgtgaggccaccgtcctgcaagcgaggctt
cgacagttcggtggggatcgtcaagctgccgcagacagtctgaatatacccaagcgtacg
ttcaatcgtaaatgtctcaggttggggatcaggtattga
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