Pectobacterium parmentieri WPP163: Pecwa_3102
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Entry
Pecwa_3102 CDS
T01106
Name
(GenBank) succinate dehydrogenase or fumarate reductase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa00020
Citrate cycle (TCA cycle)
pwa00190
Oxidative phosphorylation
pwa00650
Butanoate metabolism
pwa01100
Metabolic pathways
pwa01110
Biosynthesis of secondary metabolites
pwa01120
Microbial metabolism in diverse environments
pwa01200
Carbon metabolism
Module
pwa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pwa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pwa_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Pecwa_3102
00650 Butanoate metabolism
Pecwa_3102
09102 Energy metabolism
00190 Oxidative phosphorylation
Pecwa_3102
Enzymes [BR:
pwa01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Pecwa_3102
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Pyr_redox_2
DAO
HI0933_like
FAD_oxidored
Thi4
BEX
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
ACX88844
LinkDB
All DBs
Position
complement(3381902..3383668)
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AA seq
588 aa
AA seq
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MNLPVREFDAVVVGAGGAGMRAALQISQMGQSCALLSKVFPTRSHTVSAQGGITVALGNT
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGSIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGC
TAICIETGEVVYFKAKATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPLQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCEGPWGPHAKLKLDHLGKDVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI
PTKVSGQALTVNEKGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRSAGLHLK
ESLEEQGESRDASESDIEASLDRMNRWNNTRSGEDPVEIRKALQSCMQNNFSVFREGDAM
AKGLEELKVIRERLKDARLDDTSSEFNTQRIECLELDNLMETAYATAVSANFRTESRGAH
SRFDYPERDDENWLCHSLYLPQTDSMTRREVNMQPKLRPAFPPKIRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgccagtcagagaatttgatgcagtggttgtgggtgcgggtggcgcaggtatg
cgtgccgcgctacaaatctcccaaatgggccagtcctgtgccctattatcgaaagtgttc
ccaacccgttctcatactgtatctgcgcagggcggtattaccgtcgcgttgggtaatacc
catgaggataactgggaatggcatatgtatgacaccgtcaaagggtcggattacattggc
gatcaggacgcgattgaatatatgtgtaaaaccggcccggaagcgattctggaactggaa
cacatggggctaccgttctcccgtctggatgatggcagcatttatcagcgtccgttcggt
ggtcaatccaagaattttggcggtgagcaggctgcacgtactgccgcagccgctgaccgt
accggccatgcgctgctgcacacgctgtatcagcagaacctgaaaaatcacaccactatt
ttctccgagtggtatgccctcgatctggtgaaaaatcaggatggcgcggttgtcggctgt
acggcgatctgtatcgaaaccggtgaagttgtctatttcaaagcgaaagcaaccgtgctg
gcaaccggcggcgcgggccgtatctaccagtccaccaccaatgcgcacattaataccggc
gacggcgtgggcatggcattgcgtgccggtgttccgttgcaggacatggaaatgtggcag
ttccacccaacgggtattgctggtgcgggtgtgctggtcaccgaaggctgtcgtggtgaa
ggcggctatttgctgaataagcacggtgagcgtttcatggaacgctatgcgccaaacgcg
aaagatctggccggtcgtgatgtggttgctcgttctattatgatcgagattcgtgaaggc
cgtggctgtgagggtccatgggggccgcacgccaagctgaagttggatcatctgggtaaa
gacgttctggaatctcgtctgccgggtattttggaactgtcccgcacgtttgctcacgtc
gatccggtaaaagaaccgattccggttatcccaacctgtcactacatgatgggcggtatt
ccgaccaaagtgagcggtcaggcgttgacggtaaacgagaaaggcgaagatgtggtgatc
cctgggctgttcgccgtgggtgaaattgcctgcgtatcggttcatggtgccaaccgtctg
ggcggtaactcgttgctcgacctggtggtattcggtcgctctgccggacttcacctgaaa
gaatctctggaagagcagggcgaaagccgtgatgccagcgaatccgatattgaagcgtcg
ctcgaccgtatgaatcgttggaacaatacccgttccggtgaagatccggttgaaatccgc
aaggcgctgcaatcctgcatgcagaataacttctcggtattccgtgaaggcgatgcgatg
gcgaaagggttggaagagctgaaagtgatccgtgagcgcctgaaagacgcacgtctggat
gacacctcaagcgagttcaacacccagcgcattgagtgtctggaattggataacctgatg
gaaacggcttatgcaacagcggtttcggctaacttccgtaccgaaagtcgtggggcgcat
agtcgcttcgattacccagagcgtgacgatgaaaattggttgtgccattcgttgtatctg
ccgcaaaccgacagcatgacgcgccgtgaggtgaacatgcagcctaaattgcgtccggcg
ttcccgccgaaaatacgtacttattaa
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