Pectobacterium parmentieri WPP163: Pecwa_3104
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Entry
Pecwa_3104 CDS
T01106
Name
(GenBank) succinate dehydrogenase, cytochrome b556 subunit
KO
K00241
succinate dehydrogenase cytochrome b subunit
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa00020
Citrate cycle (TCA cycle)
pwa00190
Oxidative phosphorylation
pwa00650
Butanoate metabolism
pwa00720
Other carbon fixation pathways
pwa01100
Metabolic pathways
pwa01110
Biosynthesis of secondary metabolites
pwa01120
Microbial metabolism in diverse environments
pwa01200
Carbon metabolism
Module
pwa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pwa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pwa_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Pecwa_3104
00650 Butanoate metabolism
Pecwa_3104
09102 Energy metabolism
00190 Oxidative phosphorylation
Pecwa_3104
00720 Other carbon fixation pathways
Pecwa_3104
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Gene cluster
GFIT
Motif
Pfam:
Sdh_cyt
Fumarate_red_D
Motif
Other DBs
NCBI-ProteinID:
ACX88846
LinkDB
All DBs
Position
complement(3384009..3384398)
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AA seq
129 aa
AA seq
DB search
MGKSVKKQRPVNLELQTIQFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSEEGFLR
AAEIMDSFIVKFIVWGILAALAYHIVGGLRHLLMDFGYIEEDLAAGKRSANISFIITVVL
SILAGVLVW
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
gtgggcaaatccgtgaaaaaacaaagacctgtcaatctggaattgcagacgattcagttc
cccgttactgcgatagcatctattcttcaccgcgtctccggcgttatcacctttgtcgct
gtcggtattttactgtggctgttaggcacttctctttcttcagaggaagggttcctacgc
gccgcggaaattatggatagtttcatcgtcaagtttatcgtctggggcatcctcgctgcg
ttggcttatcacattgttggtggtttacgtcacctgttgatggattttggctatatagaa
gaagaccttgccgcaggtaagcgttctgcaaatatttcatttattattactgtcgtgctt
tcaattctggctggagtcctcgtatggtaa
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