Pectobacterium parmentieri WPP163: Pecwa_3165
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Entry
Pecwa_3165 CDS
T01106
Name
(GenBank) transcriptional regulator, LysR family
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pwa
Pectobacterium parmentieri WPP163
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwa03000
]
Pecwa_3165
Transcription factors [BR:
pwa03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Pecwa_3165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
EcoRI
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
ACX88907
LinkDB
All DBs
Position
complement(3447447..3448346)
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AA seq
299 aa
AA seq
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MNLSIKQLRAFIALTETDNFTRAAQKINLSQPAFSSLIAGLEEEVGYRLFDRDTRKVQLN
ADGLHFIEIARRLVQTHDDAVGEIKSYATGYKGKIVLAVLPSMAVEWLPQVLTQYHRAYP
KIKVELLDTQWDRCLKAVLDGHADLALTAGQPSPGTFSSRMLFADSFYLICHNQHPLAQR
ANVDVVDVVQYPFVGFCKGTSIRQYTDQLIEPEGFNYVLEVRQLTTMMGLVAANYGVSIV
TGLTLFQFQHKDIAIIPFRDLSLQRGIYLVTDKERQLSVCAKEFYDFLLERAESFVPAT
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaacttatcgataaaacaattacgggcctttatcgcgttgacagaaactgataatttc
acgcgtgccgcccagaaaataaatctctctcagcctgcatttagttcattaattgccggg
ttagaggaagaggtcggctatcggttatttgaccgtgatacccgtaaagtgcaactcaat
gctgatgggctccatttcattgagattgcccgtcgtctggtgcaaacccatgatgatgct
gtcggtgagatcaagtcttatgccaccggatataaagggaaaattgtgttggcggtactg
ccgtcaatggcggtggaatggttgcctcaggtattgacgcagtatcaccgggcttacccc
aagattaaggtcgagctgttggatacacagtgggatcgttgtctgaaagcggtgctggat
ggtcacgccgatctggcgctgacggcagggcagccatcgccgggaacgtttagctcccgc
atgctgttcgccgatagcttctatctgatctgccataaccagcacccgctggcacaacgc
gctaatgttgatgtggttgatgtggtgcagtatccgtttgttgggttttgcaaaggcacc
agtatccggcagtacaccgatcagcttatcgaaccggaaggctttaactacgtgctggaa
gtgcgtcagttgaccacaatgatggggctggtggcggcaaattatggtgtgagtattgtt
acggggctgacgctgttccagttccagcacaaagacattgcgattatcccgtttcgggat
ttatcgttgcagcgcggtatctatctggttacggataaagaacgccagctttcggtgtgt
gcgaaagagttttatgattttcttctggaacgggcagaaagttttgtgcccgctacgtga
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