Pectobacterium parmentieri WPP163: Pecwa_3211
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Entry
Pecwa_3211 CDS
T01106
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pwa
Pectobacterium parmentieri WPP163
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pwa03032
]
Pecwa_3211
03400 DNA repair and recombination proteins [BR:
pwa03400
]
Pecwa_3211
Enzymes [BR:
pwa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Pecwa_3211
DNA replication proteins [BR:
pwa03032
]
Prokaryotic type
DNA Topoisomerases
Pecwa_3211
DNA repair and recombination proteins [BR:
pwa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Pecwa_3211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Peptidase_M13_N
Motif
Other DBs
NCBI-ProteinID:
ACX88953
LinkDB
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Position
complement(3502764..3505403)
Genome browser
AA seq
879 aa
AA seq
DB search
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLTEVVNGCLAYIDDEDITLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRARGEVETDAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRRE
VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAASPAEAKASLIAQAWELGSV
STMLERAGDDAARPEWLEPEFGIRDGHYYLTEQQAQAILDLRLQKLTGMEHEKLLDEYKD
LLAEIAELLYILNSPERLMEVIREELEAIKTQYSDERRTEITANTADINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGRGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPVREYEEGRHIFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSDEAMLFSAEGKVVRFSEQAVRSMGRTATG
VRGINLQGEDRVVSLIIPRGEGDILTVTQNGFGKRTAVSEYPTKSRATKGVISIKVSERN
GKVVGAVQVDAADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDEHVVGLQRVA
EPVEDEELDGVVSVEGEIAEDDDAIDDIDGDDDIAEDDE
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaatcacaccggtcaacattgaagaagagctgaaaagctcg
tatctggattatgcgatgtccgttattgtcggacgtgcattgccagatgttcgagatgga
ctgaaaccggtacaccgccgcgtactgtatgcgatgagcgtactgggtaacgactggaac
aaaccgtataaaaaatccgcccgtgtcgtcggggatgtcatcggtaaataccacccgcac
ggcgactctgccgtttatgaaaccatcgtgcgtatggcgcagcctttctcactgcgctac
atgctggttgatggtcagggtaacttcggttcgattgacggcgactccgctgcggccatg
cgatataccgaaattcgcatgtcgaaaattgctcacgaactgctggccgatctcgaaaaa
gagacggtcgattttgtgccgaactatgacggcaccgagcagattcctgacgtcatgcct
acgcgtattcccaacctgctggttaacggttcttccggtatcgccgtcgggatggcaacc
aatattccgccgcataacctgactgaagtcgtgaacggctgtttggcgtatatcgacgat
gaagacattaccctcgaagggttgatggagcacatcaaaggcccggatttcccgacggcg
gcgatcatcaatggccgacgcggcattgaagaagcctatcgcaccgggcgcggtaaaatt
tacatccgcgcacgtggcgaagttgaaacggacgcgaaaaccggacgtgaaaccatcatc
gtgcatgaaattccgtatcaggtgaacaaagcgcgcctgatcgagaaaattgccgaactg
gttaaagataaacgtattgaaggcattagcgcactgcgtgacgaatccgataaagacggt
atgcgtatcgtcatcgagattaagcgtgacgccgtgggtgaagtggtcctgaataatctg
tattcccagacgcagcttcagacgtcattcggcatcaacatggtggcactgcatcagggt
caaccgaagatcatgccgctgaaagatattctggttgcgtttgtgcgccaccgccgcgaa
gtggtgacgcgtcgtaccatttttgaactgcgtaaagcccgtgaccgcgcccatatcctg
gaaggtctggccattgcgctggcgaatatcgatccgattatcgaactgattcgtcgtgcg
gcgtcacctgctgaagcgaaagcttcactgatcgcacaagcgtgggaactgggcagcgtt
tctaccatgttggaacgtgcgggcgatgatgccgcgcgtccggagtggctggagccagag
ttcggcattcgtgacggtcactactacctgacggaacagcaggcgcaggcgattctggat
ctgcgtttgcagaaactgactggcatggagcacgaaaagctgctggatgaatataaagac
ctgctggcggagatcgccgagctgctttatatcctcaatagccctgagcgtctgatggaa
gtgatccgcgaagagctggaagcgatcaaaacgcaatacagcgacgagcgccgcacagaa
atcacggcgaacactgctgacatcaacatcgaagacctgattaatcaggaagatgttgtg
gttacgctgtctcatcagggttatgtgaagtatcagccgctgagcgactacgaagcccaa
cgtcgtggtggtcgtggtaaatcggcagcccgtattaaagaagaagactttatcgatcgt
ctgctggtggctaacacccacgacacgattctgtgcttctccagccgtggccgtctgtac
tggatgaaggtatatcaattgccggaagccagccgtggcgcacgtggtcgtccgatcgtt
aacctgctgccgcttgagccgaatgaacgtatcacggcgattctgccagtacgtgaatac
gaagaaggtcgtcatatcttcatggcaacggcgagcggtacggtgaagaaaacggcgctg
acggaattcagccgcccacgtagcgcggggatcatcgcggttaacctgaacgagggtgac
gagctgattggcgttgacctgactgatggtagtgatgaagcgatgctgttctcagcggaa
ggtaaagtagtccgcttctctgaacaggcggtgcgctctatgggccgaacggcaacgggc
gtccgtggtatcaacctgcaaggtgaagatcgcgtggtatcgttgattattcctcgcggt
gagggcgatatcctgaccgtcacgcaaaatggctttggtaagcgtactgccgtgagtgag
tatccaaccaagtcacgtgcgacgaaaggggttatctctatcaaggtcagcgagcgtaac
ggtaaagtggttggtgcggttcaggttgacgccgctgaccagatcatgatgatcaccgat
gcgggaacgctggtacgtactcgcgtgtctgaagtcagcatcgttggccgtaacacacag
ggtgtgacgctgattcgtacagcggaagacgaacatgttgttggcctgcagcgtgtggcc
gaaccggtagaagatgaagagctggatggcgtggtaagcgttgaaggcgaaatcgccgaa
gacgatgatgctatcgacgacattgatggcgatgatgatatcgctgaagatgacgaataa
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