Pectobacterium parmentieri WPP163: Pecwa_3233
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Entry
Pecwa_3233 CDS
T01106
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Pecwa_3233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pwa03400
]
Pecwa_3233
DNA repair and recombination proteins [BR:
pwa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Pecwa_3233
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Pecwa_3233
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_C
RecR_ZnF
HHH
FYVE_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ACX88975
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All DBs
Position
complement(3531996..3532601)
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AA seq
201 aa
AA seq
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MQTSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRNRSGGMRLAQALTRAMSEIGHCSDC
RTFTEQDVCAICSNPRRQQNGQICVVESPADIHAIEQTGQFAGRYFVLMGHLSPLDGIGP
DDIGLGRLEERLQVESINEVILATNPTVEGDATANYIAELCAQHGVMASRIAHGVPVGGE
LEMVDGTTLSHSLAGRQPFRF
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccagtccgcttctggaatcattgatggaagcactgcgctgcctgccgggcgtt
gggcctaaatcggcgcagcgcatggcgtttcaactgctgcaacgcaatcgcagcgggggt
atgcgtctggcgcaggcgttgacgcgggcgatgtccgaaatcggtcactgtagcgattgt
cggacattcaccgagcaggacgtttgtgcgatttgctcgaacccgcgccgccagcaaaat
gggcagatttgcgtggtagaaagcccggctgatattcatgctattgaacagacggggcaa
tttgccggtcgctactttgtgctgatggggcatttgtcgccgctggatggcattggccca
gacgatatcggtttggggcggttggaagagcgcctgcaagtggaatcgataaacgaagtc
attttggctactaacccgacggtagaaggtgatgctacggcgaactatatcgctgaactc
tgcgcgcaacacggtgtgatggccagtcgcattgcacacggagttccggttggtggtgag
ctggaaatggtcgatggcaccacgctctcccattctctggcaggtcgtcaacctttccgg
ttttaa
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