Pectobacterium parmentieri WPP163: Pecwa_3235
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Entry
Pecwa_3235 CDS
T01106
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa03030
DNA replication
pwa03430
Mismatch repair
pwa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pecwa_3235
03430 Mismatch repair
Pecwa_3235
03440 Homologous recombination
Pecwa_3235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pwa03032
]
Pecwa_3235
03400 DNA repair and recombination proteins [BR:
pwa03400
]
Pecwa_3235
Enzymes [BR:
pwa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pecwa_3235
DNA replication proteins [BR:
pwa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pecwa_3235
DNA repair and recombination proteins [BR:
pwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pecwa_3235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_tau_4
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_18
AAA_16
AAA_14
ResIII
AAA_30
AAA_2
AAA_assoc_2
TsaE
nSTAND3
AAA_7
RCF1-5-like_lid
PIF1
SKI
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ACX88977
LinkDB
All DBs
Position
complement(3532971..3535043)
Genome browser
AA seq
690 aa
AA seq
DB search
MSYQVLARKWRPQTFTQVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTTIARLLAK
GLNCEQGVTATPCGQCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
EQIRAHLEQVLQAENLANEPRALQLLARAADGSLRDALSLTDQAIAMGQGQVTTASVSQM
LGTLDDEQPLALIEALAKGDGAQVMSLLDQVAARGVDWESLLVETQTLLHRIAMVQLLPA
ALGDDYAAVEARMRELARALPPADVQLYYQTILIGRKELPFAPDRRMGVEMTLLRALAFH
PSQIIAEPVAPVSAAPAQATRAPSIQPPVQQPVATTSAMVRAPMQQQAESRDDALPSSYS
PEPPMDASAYAPPLGEPTVSASSADRHGENELPDATSQLLQARSQLLRKQGSTPPKKAEP
AASDNTRPATSALERLASVTERSIQRQNAKTSPSEPKKPEAYRWRAQNKVDEVKVDVATP
KALRSALEHEKTPELAARLAEESLERDPWAAEIHRLTLPKLVQQLALNAFKESEEAGKIH
LHLRSSQRHLNSPAAQKTLIDALTAHYGHPVELLITEDDNSAVRTPLEWRQAIYEEKLAQ
ARQSILADTTIQTLRRFFDAELDEESIRPV
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttcttgcccgtaagtggcgtccccaaacctttacccaagttgtcggt
caggaacatgtcctgaccgcgttggctaacggcctttccctaggcagaatccatcacgct
tatttgttttctggcacccgcggtgtcgggaagacaacgattgcccgtttgctggcaaaa
gggctgaattgtgaacagggcgtaacggcaacgccgtgcggtcagtgtgataactgccga
gaaatcgaacagggccgttttgtcgatttaattgaaatcgacgccgcttctcgcacaaaa
gtagaagatacgcgcgatctgttggataacgtgcagtatgcccctgcgcgtgggcgattc
aaggtgtacctgattgacgaagtacacatgctatcgcgccacagctttaatgcgctgctg
aaaacgttggaagaaccccctccacacgtcaaatttctgctggcaaccaccgatccgcag
aaattgcctgtgactattctgtcgcgctgcctgcaatttcaccttaaagcgctggatgtc
gaacagattcgtgcgcatttggaacaggtattacaggctgaaaatctcgccaatgaacca
cgtgcgctgcaacttctggcgcgtgctgctgatgggagcttgcgtgatgcgctgagtttg
accgatcaggctattgccatggggcaggggcaggttacgaccgcttcggtcagccaaatg
cttggcacattggacgacgagcaaccgctggcacttattgaagcgttggcgaaaggcgat
ggcgcacaggtgatgtcgctgttagatcaagttgctgcacggggtgtggactgggaatcg
ctgttggtggaaacccagacgctgctgcatcgtattgcgatggttcaactgctgcctgcg
gcgttgggcgatgattacgctgccgttgaagcgcgtatgcgagagttggcccgtgcgcta
ccgcctgcggatgtgcagctttactaccagacgatactcattggccgcaaagagttgcct
tttgcgccagatcgtcggatgggcgtggaaatgacgctactgagagcgttagcgtttcac
cccagccagattatcgctgaacctgtggcacctgtaagcgctgcgcctgctcaggctacg
cgtgcgccttctattcaacctcctgtgcagcagcccgttgcgacaacatcggcgatggtt
cgtgcaccaatgcagcaacaggctgaatctcgtgacgacgcgctgccatcgtcttattct
cccgaaccgccgatggatgcttccgcgtatgcgccaccgttaggagaaccgactgtttcg
gccagttctgcggatcggcatggtgaaaacgaactgcccgatgcgacttctcagttgtta
caggctcgcagccaactcctgagaaaacaggggagtacgccaccaaaaaaggctgaaccg
gcagcgtctgacaacacgcggccggcaacttcagcgctggagcgattggcttcggtaact
gagcgtagcattcaacggcaaaacgcgaaaacctcgccttccgagcccaaaaagccggaa
gcgtatcgttggcgggcgcaaaacaaggttgatgaggttaaggtcgatgtggcgacgcca
aaggcgttgcgttcggctttagagcacgaaaaaacgccggaattggcggcgcggctggcg
gaagagtcgctggaacgggatccttgggcggcggaaatccatcgcctgacgctgccaaag
ctggtacaacaactggcactcaatgcgtttaaagagagtgaggaagcaggtaaaatccat
cttcatctgcgttcatcccagcggcatctgaattcgcctgcggcgcaaaagacgctgata
gatgcattgacggcccactacgggcatcctgtagaattactgattactgaagacgacaac
tcagcggtgcggacgccgctggagtggcgtcaggcgatatatgaagagaaactggcgcag
gcgcgtcagtcgattctggccgatacgacgattcaaacgctgcggcgtttctttgatgcg
gaactggacgaagaaagtatccgccctgtttaa
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