Pectobacterium parmentieri WPP163: Pecwa_3253
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Entry
Pecwa_3253 CDS
T01106
Name
(GenBank) ABC transporter related protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Pecwa_3253
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pwa02000
]
Pecwa_3253
Transporters [BR:
pwa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Pecwa_3253
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_29
T2SSE
AAA_23
NB-ARC
AAA_22
AAA_33
AAA_16
AAA_18
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ACX88995
LinkDB
All DBs
Position
complement(3551055..3552824)
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AA seq
589 aa
AA seq
DB search
MRLFAQLSWYFRREWRRYLGAVALLIAIAILQLLPPKLVGVIVDGVTQHGMSMAEMMQWI
GVMLLTAVMVYLLRYVWRVFLFGASYQLAVELREDFYRQLSRQHPAFYQRHRTGDLMARA
TNDVDRVVFAAGEGVLTLVDSMVMGCAVLVVMCTQISWELTLLALLPMPVMAIFIKRYGT
QLHNRFKSAQAAFSSLNDQAQESLTSIRMIKAFGLENYQSARFAQVAADAGAKNMHVARV
DARFDPTIYIAVGLSNLLAIGGGSWMVINGSLTLGLLTSFVMYLGLMIWPMLALAWMFNI
VERGSAAYGRIRQLLAEESVVKDGEESLPAERGVLAVDISAFHYPDNTRDALKNIQFTLA
PGNMLGLCGPTGSGKSTLLALILRHFDSCSGDIRYHDRPLSVIRLDELRGRFAVVGQMPF
LFSDTVAQNIALGRPDATQQEIEQAARLASVHDDILRLPQGYQTEVGERGVMLSGGQKQR
IAIARALLLDAEILVLDDALSAVDGRTEHQILQNLKTWGEKRTLIISAHRLSALTGADEI
VVLQQGQTVQRGTHRTLAAQPGWYRDMHRYQQLEAALDDVPQPEGTTNE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
gtgagattgtttgctcaactaagttggtattttcgccgcgaatggcgtcgctatctgggg
gctgtcgcactactcattgcgattgctattctgcaattgctgcctccaaaactggttggc
gtgattgtcgatggtgtgacgcaacatggtatgtcgatggctgaaatgatgcagtggatt
ggcgtgatgttactgaccgccgtcatggtctatttgctgcgctacgtgtggcgagtgttc
ctgtttggtgcgtcataccagctagcggttgagttacgagaggatttttatcgccagtta
agccgccaacatcctgcattttaccaacgtcatcgtaccggcgatctcatggcgcgcgcc
actaacgatgtcgatcgcgtggtatttgctgccggagagggggtgctgacgctggtcgat
tcgatggtgatgggctgtgctgtgctggtggttatgtgtactcagatcagttgggaactc
accctgctggcactgctcccaatgccggtcatggcgattttcatcaaacgctatggcacc
caactgcataaccgttttaaatccgcacaggcggcgttttcttcgcttaacgatcaggcg
caggaaagcttgaccagcatccggatgattaaagcctttggattggaaaactatcaatca
gcgcgtttcgcgcaggttgccgcagatgctggtgccaaaaacatgcacgttgcccgggtc
gatgcccgcttcgatcccaccatttatattgccgtcggattgtcgaatttgctggccatt
ggcggcggcagttggatggtgatcaacggttcgctgacgttaggtttgttgaccagtttc
gtcatgtatctgggattgatgatatggccgatgctggcgctggcctggatgtttaatatt
gttgagcgcggcagtgcggcatatggccgcattcgacaactcctcgcggaagaatcggtg
gtgaaagacggtgaggaatcattacctgccgagcggggcgtgctagcggtggatatctcc
gcgtttcactaccccgataatacccgtgatgctttaaaaaatattcaatttacgttggca
ccgggcaatatgttgggattatgcgggccgacaggatcggggaaaagtacgctgctggcg
ttgattttgcgtcattttgatagctgctcgggagacattcgttatcacgatcgtccgttg
agtgtcattcggttggatgaactgcgcggtcgttttgccgttgtgggacaaatgcctttt
ctgttctccgatacggtggcacaaaacattgcactgggtcgaccagatgccactcagcag
gagattgaacaagcagcacggcttgctagcgtacacgatgatattttgcgtttacctcag
ggttaccagacagaagttggcgagcgcggcgtgatgctatctggcggtcaaaaacagcgt
attgcaattgctcgagcattattgctagatgctgagattttggtgctggacgatgcgttg
tctgcggttgatgggcgaacggagcatcagattttgcaaaatcttaaaacatggggtgag
aaacggacgctgatcatcagcgcacatcgtttgtcggccttaaccggagcggatgaaatc
gtggtgttgcaacaagggcaaacggtacagcgtggtacacatcggacgctggcggcacag
cccggttggtatcgggatatgcaccgctaccaacagttggaggccgcgctggatgatgtg
cctcagccagaaggaacgacaaatgaatag
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