Pectobacterium parmentieri WPP163: Pecwa_3778
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Entry
Pecwa_3778 CDS
T01106
Name
(GenBank) D-alanine/D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa00470
D-Amino acid metabolism
pwa00550
Peptidoglycan biosynthesis
pwa01100
Metabolic pathways
pwa01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pecwa_3778
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pecwa_3778
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Pecwa_3778
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pwa01011
]
Pecwa_3778
Enzymes [BR:
pwa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Pecwa_3778
Peptidoglycan biosynthesis and degradation proteins [BR:
pwa01011
]
Precursor biosynthesis
Amino acid ligase
Pecwa_3778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
TTL
ATP-grasp_3
ATPgrasp_ST
RimK
ATPgrasp_YheCD
Decapeptide
GARS_A
Motif
Other DBs
NCBI-ProteinID:
ACX89513
LinkDB
All DBs
Position
complement(4169667..4170587)
Genome browser
AA seq
306 aa
AA seq
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MTEKVAVLLGGTSAEREVSLLSGQAVLAGLKEAGINAHAVDTRDFPVTKLKEDGFTRVFI
ALHGRGGEDGTLQGVLEFLELPYTGSGVMASALTMDKLRTKQVWQAVGLPVSPYVALDRR
HYSETAANELLAKFTHLGLPLIVKPSREGSSVGMSKVNALSELPAALEEAFRHDDDVLVE
KWLSGPEYTVAILGDEVLPSIRIQPAGTFYDYEAKYLSDDTQYFCPSGLPDDQEQALAVL
AMAAYRAVDCSGWGRVDFMLDSDGAFYLLEVNTSPGMTSHSLVPMAARQRGLTFSQLVVK
ILELAG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaaagttgctgtattgcttggtggaacctctgctgaacgtgaagtgtcgtta
ctttccggtcaggcggttttggctggactgaaagaagcgggcatcaatgcacatgcggtc
gatacccgtgacttccccgtgacgaaattgaaggaagacggttttacccgcgtattcatc
gccttacatggtcgtggtggtgaagatggcacattacagggcgtgctggaatttctggaa
ttaccctataccggcagcggcgtgatggcatccgcactgacgatggataagctccgtacc
aagcaggtgtggcaagcagtcggattaccagtatcgccttacgtggcattggatcgtcgc
cactattcggagacggcggcaaatgaattgctggcgaaattcacgcatctcggattgcca
ctgattgtcaaaccaagccgtgaaggttccagcgtcggcatgagcaaagtgaatgcgctt
agtgagttgcctgcggcactggaagaagcattccgtcatgatgacgatgttctggtcgag
aaatggctgagtggcccagagtataccgttgctattctgggggatgaggtattgccgtct
attcgcatccagcctgcggggacgttttacgactatgaagcgaagtatttgtcggacgat
acccagtatttctgtccaagtggcctgccggacgatcaagagcaggcgttagcggtactg
gcgatggcggcttaccgtgcggtggactgtagcggatggggacgcgtcgattttatgtta
gatagcgacggtgctttctacctgcttgaagtgaatacgtctccagggatgacgagtcac
agcctggttcctatggcggcgcgtcaacgtggtctgactttttcacaattggtcgtgaaa
attctggagcttgctggctga
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