Pectobacterium parmentieri WPP163: Pecwa_3794
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Entry
Pecwa_3794 CDS
T01106
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa00061
Fatty acid biosynthesis
pwa00071
Fatty acid degradation
pwa01100
Metabolic pathways
pwa01212
Fatty acid metabolism
pwa02024
Quorum sensing
pwa04146
Peroxisome
Module
pwa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Pecwa_3794
00071 Fatty acid degradation
Pecwa_3794
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Pecwa_3794
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pecwa_3794
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pwa01004
]
Pecwa_3794
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pwa04147
]
Pecwa_3794
Enzymes [BR:
pwa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Pecwa_3794
Lipid biosynthesis proteins [BR:
pwa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Pecwa_3794
Exosome [BR:
pwa04147
]
Exosomal proteins
Exosomal proteins of breast milk
Pecwa_3794
Exosomal proteins of breast cancer cells
Pecwa_3794
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ACX89529
LinkDB
All DBs
Position
complement(4188434..4190239)
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AA seq
601 aa
AA seq
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MTNHLQPYHVVHRVQDRINHCAGRIALREWTPAGEQQLTWTQAGQRIQRIASALLAQGVD
VQERVAIFSHNSMNWSLADLALLHLRAISVPIYATNTAAQAAFIINDADIRTIFVGGQEQ
LDALLTLRDTCPQLRNIIVMDEGVNLHGSDIAQSLHEFEAQAVDDFWRDEWQQRIDSRDL
NDLFTLIYTSGTTGEPKGVMLDYTNMAMQLKLHDERLSMSENDISLSFLPLSHVFERAWS
FFVMHCGAQNVYLSDTNLVRGAMQAVKPTVMCAVPRFYEKVYSAIHEKVAQAPWYRQRLF
DWAVTQGQHAFLAKQAAKKGGLLRRIMHHYADRLVLGKLRQLLGGEIRFMPAAGARLDDN
IILFFRSIGIRIIYGYGMTETCATVSCWEENRFRLGSIGTPLPGIEVRIGEEKEILVRGA
TLMRGYFHRPQETADAFTADGWLKTGDAGELDANGNLFITERLKDLMKTSGGKYIAPQHL
EGTLGQDRFIEQVAIIADTRKYVSALIVPCFEALEEYAHSINLKYHDRLELLRHSHIIEL
FEQRLREMQKELSRVEQVKKFTLLPVPFSMAEGELTPTLKLRRKIINQRYQLEIDAMYAE
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgactaatcatttacagccataccatgtggtgcaccgggttcaagatcggatcaatcac
tgcgcaggtcgtattgcgttgcgcgagtggacgcctgcgggcgagcagcaacttacctgg
acacaggcaggacagcgcattcagcgcattgccagtgcgcttttagcgcagggcgtggat
gttcaggaacgggttgcgattttctctcataactcaatgaattggtcgctggccgacctt
gcgctattgcacctgcgtgcgatcagcgtgccaatttatgccacgaatacggcggctcag
gcggcgttcattatcaatgatgcggatatccgcacgatattcgtcggtggtcaggagcag
ttggatgcgctgctgacgctgcgcgatacctgcccacagttgcgaaatattatcgtgatg
gatgagggcgttaacctgcacggtagcgacattgcgcaatctctgcatgagtttgaagcg
caggcggtagacgatttctggcgtgatgaatggcagcagcgcatcgatagtcgcgatctc
aacgatctgtttacgctgatttatacctctggcaccacgggtgaacccaaaggtgtcatg
ctggattacaccaacatggcgatgcaacttaagctgcatgacgagcgcttaagcatgtca
gaaaacgacatctcgcttagcttcttaccactttcccatgtattcgagcgtgcctggagc
ttcttcgtgatgcactgtggcgcacagaacgtgtacctcagcgatacgaatctggtgcgt
ggcgcgatgcaggcggtgaagccgacggtgatgtgcgccgtcccccgtttttatgaaaaa
gtgtatagcgccattcatgaaaaagtggcgcaggcaccgtggtatcgtcagcggctcttc
gactgggctgtcacacaggggcagcacgcttttctggctaagcaggcggcgaaaaagggc
ggactcttgcgccgcattatgcaccactatgccgaccgactggtgttagggaaactgcgc
cagcttctgggaggcgaaattcgctttatgccggcagcaggcgcacgactggatgacaac
atcattttgtttttccggtcgatcgggattcgtattatttatggttatggcatgaccgaa
acctgtgcgacggtttcctgctgggaagagaaccgtttccgcttaggttctattggtacg
ccgttaccgggtattgaggttcgcattggcgaggaaaaagagatcctggtgcgcggcgcg
accctcatgcgggggtatttccatcgtccacaggaaaccgcagacgcttttaccgcagac
ggctggctgaaaaccggcgatgcgggagagctggacgctaacggtaatttgtttattacc
gaacgcttgaaggatctgatgaaaacctcgggcggtaaatatatcgccccgcagcatctg
gaaggcacgctggggcaggatcgtttcattgagcaggttgcgattatcgcggacacgcgt
aagtacgtgtcagcactgattgttccttgtttcgaggcgctggaagaatacgcccactct
attaatctgaagtaccacgatcgtctggaactgttgcgtcacagccatattattgaactg
ttcgaacagcgcctgcgggagatgcagaaagagctttcccgcgttgagcaggtgaagaaa
ttcacgttgttacctgtgccgttttcgatggcagaaggagagctgacgccaacgctcaaa
ctacgcaggaagatcatcaaccagcgttaccaactggaaattgatgcgatgtacgccgag
tcttga
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