Pectobacterium parmentieri WPP163: Pecwa_3871
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Entry
Pecwa_3871 CDS
T01106
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pwa
Pectobacterium parmentieri WPP163
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pwa01011
]
Pecwa_3871
Enzymes [BR:
pwa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Pecwa_3871
Peptidoglycan biosynthesis and degradation proteins [BR:
pwa01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Pecwa_3871
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
SLT_4
TPR_4
Motif
Other DBs
NCBI-ProteinID:
ACX89604
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All DBs
Position
complement(4273869..4275803)
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AA seq
644 aa
AA seq
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MQVIKAGHWWYAVAAVCLAGVSGHVLADSLDEQRQRYQQVKQAWDSNQMDTVAQLMPTLR
SYPLYPYLEYRSLTQDLSQVSATQVKQFMATHPTLPPARNLNTSFVNELARRQDWIGLLA
FSPQPPKPVSARCNFYYAQWATGQRQGVWEATRDIWLTGRSLPNVCDKLFSVWQQAGEQT
PLTTLERARLAMDEGSASLVSYLIKQLPDDYKTMGDALLKLQNDPTSLESFARTVGPTDF
TRKVTLSAFTRTARQDTDNARSMLPVIARLQKMSAAERQDMEETIAWRLMGNDATPEQAQ
WRDGVVRRSTSTTLLERRVRMALGAGDRQGLTSWMARLPAEALQKDEWRYWRAVVLLEQG
KHQEGETLLRSLMQERGFYPMAAAQKLNERYPMTIMTAVKPDPSLSQLPEITRVRELMFW
QMDNLARSEWVGLVANRSKPQQEALARYAFEQRWADLSVQATIVAKLWDHLEERFPLAWN
DEFRRETQGKGISQSYAMAIARQESAWNPKARSPVGASGLMQLMPATAQHTAKMSNITFY
NNSSQLFDPETNILLGTSYLEYVYQTFGRNRILSSAAYNAGPSRVNTWLRNSAGRIDPVA
FIESIPFSETRGYVKNVLAYDVFYRYFLNQPANVLTDGEWQRRY
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgataaaagcaggtcattggtggtacgccgttgcggcggtatgtctggctggg
gtgtccggtcatgtgctggcggattctctggacgaacagcgtcagcgctatcagcaggtt
aagcaggcatgggacagcaaccagatggacacggtagcgcaactaatgccgacgctgcgc
agctacccgctttatccttatcttgaatatcgctcgcttacgcaggatctgagccaggtc
agcgcgacgcaggtgaaacagtttatggcaacgcacccgacgttgccgcccgctcgtaat
ctcaataccagctttgtcaatgaactggcgcgccgtcaggactggatcgggctgttggca
tttagcccgcagccgccaaagccggttagcgcccgctgtaacttctattacgcccaatgg
gcaaccggtcagcgtcagggcgtgtgggaagccacgcgtgatatctggctgaccgggcgt
tcgcttcctaacgtgtgcgataaactcttctccgtctggcagcaggcgggcgaacagacg
ccgctgacaacgctggaacgtgcacgtctggcgatggatgaaggcagcgctagtctggtg
agctacctcatcaagcaactgcccgacgattataaaacgatgggcgatgcgctgctgaaa
ctccagaatgaccccacttcgttggagagctttgctcgtaccgtcgggccaacggatttc
acccgtaaagtcacgctgtcagccttcacgcgtacagcgcgccaggatacggacaatgcc
cgttcgatgctgccagtcattgcccgtttgcaaaaaatgagcgccgcagagcgtcaggat
atggaagaaaccatcgcctggcgtttgatggggaatgatgctacgccagagcaggcgcag
tggcgagatggcgtggtgcgacggagcacatcgaccaccttgctggaacgtcgcgtgcgc
atggcgttgggcgcaggcgatcgtcagggtttgacaagctggatggcgcgtttgccggcg
gaggcgttgcagaaagacgaatggcgctactggcgtgccgtcgtgctgttggagcagggt
aaacatcaggaaggcgagacattattacgcagcctgatgcaggaacgcgggttctacccg
atggcggcggcgcagaaactgaacgagcgctatccgatgactatcatgacagccgtgaag
cctgacccttctttatcacaattacccgaaatcactcgcgtgcgggaattgatgttctgg
cagatggataatctggcgcgtagcgagtgggtcgggctggtggcgaatcgcagtaagccg
cagcaggaggcgttggctcgctatgcgtttgaacagcgctgggcagatttaagcgtacag
gcgacgattgtcgcaaaactgtgggatcatcttgaagaacgcttcccgctggcctggaat
gatgaattccgccgtgaaacgcagggcaaagggattagccagagctatgcgatggcaatc
gcccgtcaggagagcgcctggaatccgaaagcgcgttcgcccgtcggcgcatcgggtctg
atgcagttgatgcctgcgacggcgcagcataccgctaaaatgagcaatatcacgttctac
aataacagtagtcagttgttcgatcccgagacgaatattctgttgggaacgagctatctg
gagtacgtgtaccagacatttggtcgtaaccgcattctgtcttctgcggcttacaatgcc
gggccgtcgcgtgtgaatacctggctgaggaatagcgcgggacgtatcgatcccgttgcg
tttatcgaaagtatcccgttctcggaaacacgcggttacgtgaaaaatgtgctggcctat
gacgtcttctaccgctatttcctcaatcagccagccaatgtgctgacggatggggaatgg
cagcggcgttactga
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