Pectobacterium parmentieri WPP163: Pecwa_3922
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Entry
Pecwa_3922 CDS
T01106
Name
(GenBank) cell wall hydrolase/autolysin
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Pecwa_3922
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pwa01011
]
Pecwa_3922
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pwa03036
]
Pecwa_3922
Enzymes [BR:
pwa01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
Pecwa_3922
Peptidoglycan biosynthesis and degradation proteins [BR:
pwa01011
]
Peptidoglycan biosynthesis and degradation
Amidase
Pecwa_3922
Chromosome and associated proteins [BR:
pwa03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Pecwa_3922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
LysM
LysM3_LYK4_5
AMIN
NMB0315_dom_I
LysM1_NFP_LYK
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
ACX89653
LinkDB
All DBs
Position
complement(4329901..4331529)
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AA seq
542 aa
AA seq
DB search
MMSRMVKLFIGVWLLLAGAAWAANLSDIKVDNASGQATVRLSFSGQPIYAFFPLSNPARV
VIDIRQSGVIQGLPLDFSGQNLIKRVRSSNAQDAQSLRLVLDLTQAAKTRAVTQKEGSGY
VVVFTITGDKAKTVQAPTPPVSRQQNSVPAEPAKNPFTNKPTVVVSGGASSPARQGNERV
VVAIDAGHGGQDPGAIGTNGLREKNVTISIARKLQVLLNNDPAFKGVLTRDGDYFISVMG
RSDVARKQGANLLVSIHADAAPNRNAKGASVWVLSNRRANSEMANWLEQHEKQSELLGGA
GDLLANSGADPYLSQAVLDLQFGHSQRVGYDVATKVLRELQRVGGLHKRRPEHASLGVLR
SPDIPSLLVETGFITNISEERLLGSNDYQEKIANAIYQGLRSYFQTHPMQSLPKQESRPR
QSAASDTATSGSTRHTVARGETLSSIARRYGVSLAAMRDVNKLNKDIVWVGQRLNVPATG
TKQTASTPAPKKTAPVKHKVVKGDSLSAIAARYGVSMKEIQQANNLRSGSVQLGQTLIIP
SA
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtcgtatggttaagctgttcatcggcgtatggctattgcttgcgggagcagcg
tgggccgccaatctatcggatatcaaggtggataatgcgtcaggccaagccacggtgcga
ctgagctttagcggccagccgatttatgcctttttcccgcttagcaaccctgccagagtg
gtcatcgatattcgtcagagcggtgtcattcaggggctgccgttggatttcagcgggcaa
aatctgattaagcgcgtgcgaagcagcaatgcgcaggatgcacaaagcctgcggttggtg
ctggatttaacgcaggcggccaaaacgcgagcggttacgcaaaaagaaggttcgggttac
gttgtcgtgttcaccatcacgggtgataaagcgaaaacggtgcaagccccaacgccccct
gtttcacggcagcaaaatagtgtgccggcagagccagcaaagaatccgtttactaacaag
cctacggtcgtcgtgagcggtggggcgtcgtcgcctgcccgacagggtaatgagcgcgtt
gttgtggcgattgatgccggtcacggcgggcaagatcctggtgcgataggcacgaacggg
ctgcgagagaaaaatgtcaccatctctatcgcccgtaagctgcaagttttgctgaataac
gatcccgcctttaaaggcgtattaacgcgtgacggcgactactttatctccgtcatgggg
cgttcggacgtggcgcggaagcagggcgctaacctgttagtgtcgatccacgccgatgct
gcgccgaaccgcaatgctaaaggtgcctcggtctgggtgctatccaaccgccgtgcgaat
agtgaaatggcgaactggctggaacagcacgagaaacagtctgagttattgggcggtgcg
ggcgatttgctggcgaacagcggcgccgatccttacctcagtcaggcggtgctggatctg
caatttggccactcccagcgtgttgggtatgacgtggcgaccaaggtgctgcgtgagctc
cagcgtgttggaggcttgcataaacggcggccggaacatgccagcttgggagtgttgcgc
tcaccggatattccctctctgctggtggaaaccgggtttatcacgaatatctcggaagag
cggctattggggagtaacgactaccaggaaaaaattgccaatgcgatttatcaggggctg
agaagttacttccagacgcacccgatgcaatccctcccaaagcaggaaagccgcccacga
cagtcggcggcaagtgatactgcgacatcgggcagtacgcgtcataccgttgcgcgtggc
gaaacactttcttcgattgcacggcgttatggtgtcagcctcgcggcgatgcgtgacgtg
aataagctgaacaaggatatcgtctgggttggacagcgcctgaatgttccggctaccggg
acgaaacagacggcgtcaacgccagcgcctaaaaaaacagcgccggtgaagcataaggtc
gtaaagggtgatagcctgagtgcgatcgctgcccgttacggtgtcagcatgaaagagatt
caacaggcaaataatctgcgttccggctcggtacaactggggcaaacgctgattataccg
tctgcctga
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