Pectobacterium parmentieri WPP163: Pecwa_3934
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Entry
Pecwa_3934 CDS
T01106
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K22051
miniconductance mechanosensitive channel
Organism
pwa
Pectobacterium parmentieri WPP163
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pwa02000
]
Pecwa_3934
Transporters [BR:
pwa02000
]
Other transporters
Pores ion channels [TC:
1
]
Pecwa_3934
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
ACX89665
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Position
4347306..4350629
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AA seq
1107 aa
AA seq
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MRLILTFLLGCLLSTAALAATVPNEAQLRQQLQQAEANKGAADQAKVVEEYQAALNTLQD
RKEAQERATQYQRVIDDFPKLVQELRRQLNAEDGKPSSISENLSSNDLEQQLLQASSQLL
EQARQLQQEQDRLREIGDSLSQLPQQQTEASRMQSEAERRIQSLGTPATPLGQAQLVALQ
AESALRKSRVDELELAQLSASNRQELSRLRVDLYKKRHDRLDMLQQDLRSRLNNLRQREA
EQALERTELLAEQSGDLPAIISKQLQVNRELSVALNQQAQRMDLIASQQRQAATHTIQVR
QALSTIREQAQWLGVSPILGETLRAQIARLPEMPKPQLLDSDMAQLRVQRLHFEDLINKP
QDLDNAKQDSGDPLTSAQQRILTDQMRTQRDLLTSLISGCDSQILELTKLKVANNQLADA
LTETREAAHRDLFWVADVEPVTFTYPLKLVQDLTRLLSLDTLTQLGSALVMMVTSQETVL
PLLGALLLVGFSISSRRHYHAFMERASSRVGKVTLDHFMLTLRTVFWSLLTALPLPVLWA
ALGYGLQNAWPYPIAVAIGDSVTATVPLMWLVMISASFSHPQGLFIVHFRWSPEHVARAM
RYYRLSIAFIVPLIMALITFDKLNDREFSSTLGRLCFILLCMALSLVTAGLKRAGIPLYL
DKEGSGENSVNRAMWNILIGVPLVAALASCIGYLATAQALLARLETSVSIWFFLLVVYHI
IRRWMLIQRRRIAFDRAKQRRSEILAQRAKGEEEAQPTSSHESSSEAVEEPVVDLDAISA
KSLQLVRSILTLIALVSVIALWSEIHSAFAFLENISLWDVSSTVKGVESVQAITLGSVLI
AILIFIITAQLVHNLPALLELAILQHLDLSPGSGYAITTISKYILMLIGCLMGFSLIGIE
WSKLQWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVMRINTRA
TTISDWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLTVPAPANANSQEVTELLMDAVKR
CSLILDTPEPEAFLVDLQQGIQIFELRVFAAEVGHRMPLRHELHQLILENYRKHNLELPF
PPFQVKMDNLSRSGKTLTPRQRTPGSL
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtttgattctgacttttcttctgggatgtttattatcaaccgccgcgttggctgcc
actgtgcccaatgaggcgcagttacgccagcagctacagcaggcggaagccaacaaaggt
gcagccgatcaggcgaaagtcgttgaggaatatcaggctgcgctgaataccttacaggat
cgcaaagaagcgcaggaacgcgccacgcagtatcaacgcgtcatcgatgatttccccaaa
ctggttcaagagctacgtcgccagcttaatgccgaagacggcaaaccgtcgtcgatttca
gaaaacctctccagtaacgatctcgaacaacagttgctacaagcgagcagccaactgttg
gaacaagctcgccaactccagcaagaacaggatcgactgcgtgaaatcggtgattcactg
agccagcttccgcaacagcaaactgaagccagccgcatgcaaagcgaggcggaacgccgt
attcagtctctcggtacacccgccacgccgctgggacaagcacaactcgtcgcacttcag
gccgaatccgccctacgtaaaagtcgggtggacgagctggagttggcacagctttcagcc
agtaaccgtcaggagctatctcggctacgcgtcgatctgtataaaaagcgtcatgacagg
ctggatatgctgcaacaagatttacgtagccgactcaacaatctccgccagcgtgaagcc
gagcaagcattagaacgcaccgagcttctcgctgaacaaagtggtgatttacccgccatc
atcagcaagcaactacaggttaaccgcgagctctccgtcgcgctgaatcaacaggcgcag
cggatggatcttattgcttctcagcagcgtcaggccgcgacgcacacgatccaggtccgt
caagcgctaagcaccatccgcgaacaggcccagtggctcggcgtttcaccgatattgggg
gaaacgttacgcgcacagatcgcccgcctgccggaaatgcccaagcctcagttactggat
agcgatatggcgcagctacgcgtacagcggctgcactttgaagacctgatcaacaaaccg
caagatcttgataacgccaagcaggatagcggcgatccgttgaccagcgcacaacagcgt
attctgaccgatcagatgcgtacccagcgcgatctgctgacgtcgctgatctctggctgt
gattcacagatactggaactcaccaaactcaaagtcgccaataaccaactggcggatgct
ttgaccgaaacgcgcgaagcagcccaccgcgatttgttctgggttgctgatgttgagccc
gtgacgttcacctatccgctcaagctggtgcaggatctgacgcgtctgctgtcattggat
acactgacgcagttgggtagtgcgttagtgatgatggtgaccagtcaggaaaccgtgctg
ccgctgctgggcgcactactgttggttggcttcagtatcagttcccggcgtcactatcat
gcgtttatggagcgtgctagcagccgtgtcggcaaggtcacgctcgatcactttatgctg
acgctgcgtaccgtgttctggtctctccttaccgccctgccactgccggtactctgggca
gcgctgggctacgggctgcaaaatgcctggccctacccgattgccgtcgccatcggcgac
agcgtcaccgccaccgtgccgttaatgtggctggtgatgatcagtgcctcgttctcacac
ccgcaggggctatttattgtccacttccgctggtcgccagagcacgtagccagagcgatg
cgctattatcgcctctccatcgcctttatcgtaccgctgattatggcgctgattaccttc
gataaactcaacgatcgcgagttctctagcacactggggcggctctgcttcatccttctc
tgtatggcgctgagtctggtcacggccggattaaaacgcgccggtatcccgctgtatctg
gataaagaaggctcgggagaaaattccgttaaccgcgcgatgtggaacatactgatcggc
gtgccgctcgttgctgcgctggcctcctgcattggctatctggcgaccgcacaggcgcta
ttagcgcgactggaaacctccgtctcgatctggttcttcctgctggtggtttaccacatt
attcgccgttggatgctgattcagcgacgtcgcatcgccttcgaccgcgccaagcaacga
cgttcggaaattctggcgcaacgtgccaaaggcgaagaagaggcgcagcctacctcgtcc
catgaaagcagttcggaagccgtcgaagagcccgtcgtcgatctggatgcgatcagcgct
aaatccttgcagttggtgcgatccattctgacgctgatcgctctggtttccgtgatcgca
ctgtggtcagaaattcattcggccttcgcatttctagagaacatcagcctctgggatgtc
tccagcacggttaaaggtgtcgaaagcgtgcaggcgattacgctgggatcggtactgatc
gccattctgatcttcattattaccgcacagctagtgcataacctgcccgccctgctggag
ctggcgatcttacagcatctggatctgtcgccgggcagcggctacgcgattaccaccatc
agcaaatatattctgatgctgatcggctgtctgatggggttctcgcttatcgggatcgaa
tggtcgaaactgcaatggctggttgccgcattgggggtaggactcgggttcggcttgcag
gagatcttcgctaatttcatctccggcctgatcatcctgtttgagaaaccaatccgcatc
ggcgatacagtcacgatccgcgatctcacggggagcgtcatgcgcattaatacccgtgct
accaccatttccgactgggatcgcaaagagatcatcgtaccgaataaagcgtttatcacc
gagcagtttatcaactggtcgctgtcggactccgtcacccgtgtggtgctgaccgtaccg
gctccggcgaacgcaaacagtcaggaagtgactgagctacttatggacgcagtaaagcgt
tgttcgctgatcctcgatacgccagagcctgaagccttcctcgtcgatctacagcagggg
attcaaattttcgagctgcgcgttttcgccgccgaagtggggcaccgtatgccgctgcgc
catgaactgcatcagttgattctggaaaactaccgcaagcacaatctggagcttcctttc
ccaccgttccaggtgaaaatggacaatctgtcgcgcagtgggaaaacgctgacgccacgg
cagcgaacgccgggcagcttataa
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