Pectobacterium parmentieri WPP163: Pecwa_4018
Help
Entry
Pecwa_4018 CDS
T01106
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa00260
Glycine, serine and threonine metabolism
pwa00460
Cyanoamino acid metabolism
pwa00630
Glyoxylate and dicarboxylate metabolism
pwa00670
One carbon pool by folate
pwa00680
Methane metabolism
pwa01100
Metabolic pathways
pwa01110
Biosynthesis of secondary metabolites
pwa01120
Microbial metabolism in diverse environments
pwa01200
Carbon metabolism
pwa01230
Biosynthesis of amino acids
pwa01240
Biosynthesis of cofactors
pwa04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Pecwa_4018
09102 Energy metabolism
00680 Methane metabolism
Pecwa_4018
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Pecwa_4018
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Pecwa_4018
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Pecwa_4018
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Pecwa_4018
Enzymes [BR:
pwa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Pecwa_4018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ACX89747
LinkDB
All DBs
Position
complement(4421796..4423067)
Genome browser
AA seq
423 aa
AA seq
DB search
MYDSSFTLTDFDPELADAILHEEHRQETHVELIASENYASPLVMAIQNSVFTNKYAEGYP
GKRYYSGCEYVDVAERLAIERVKALFDCDYANVQPHAGAQANAAVFLALTNPGDTVMGMN
LAQGGHLTHGNPSNFSGRHYKIVPYGLDPETGLIDYDEMERIALETRPKMLIGGFSAYSR
HKDWARMRTIADKVGAIFWVDMAHVAGLVAAGEYPTPLPHAHVVTSTTHKTLRGPRGGII
LAKGQSEDFYKKLNAAVFPGIQGGPLMHVIAAKAIAFKEALRPEFTVYQRQVVANARAMA
RIIQLRGYKIVSDGTDNHLLLIDLSAKPYTGKEADAALSEAYITTNKNSVPNDPRSPFVT
SGLRIGTPAVTTRGFGVAECEQLAGWLCDVLDGLGAGNEELTAIRDRVREQVVALCRRYP
VYQ
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtatgactcctcttttacgctgaccgacttcgatcctgagttggccgatgccattttg
catgaagaacaccgtcaggaaacccacgttgaactcatcgcttctgagaactatgccagc
ccgctggtgatggcgatccagaattccgtcttcaccaacaaatatgcagaaggttacccc
ggcaagcgctactacagcggctgcgagtatgtagacgtagccgaacgcctggctatcgag
cgggttaaagcgctgtttgactgcgattacgctaacgttcagccccatgccggcgctcag
gctaatgcggccgtgtttctggcactgactaaccccggtgacacagtgatggggatgaat
ctggctcaaggtgggcatttgactcacggtaatccctccaacttctctggtcgccattac
aagatcgtaccttatggtcttgaccctgaaacagggcttatcgactatgacgaaatggag
cgtattgccttggaaacccggccaaaaatgttaataggcgggttctctgcctattcacgt
cacaaggactgggcgcgcatgcgcacgattgctgacaaagtgggagctatcttctgggtg
gatatggcgcatgtggctggcttagtggcagcaggtgagtacccgactccgctccctcac
gcgcatgttgtgacgagtacaacgcataagaccctgcgcggcccgcgtggtggaattatt
ttggccaaaggacagagtgaagatttttacaaaaagctcaacgctgccgtgttccccggt
attcagggcggcccgctgatgcatgttattgccgccaaagcgatagccttcaaggaagcg
ttgcgccctgagttcacggtttatcagcgtcaggttgtggctaacgccagggcaatggcg
cgtattatccaattgcggggttacaagattgtctccgacggcaccgacaaccatttactg
ctgatcgacctgtccgctaagccttataccggtaaggaggccgacgccgcgctgagcgag
gcttatatcacgacaaataagaattcggtgcctaacgacccgcgttcaccttttgttact
tcaggcttgcgtattggtacgccagccgtcacaacgcgtggtttcggtgtggcagagtgc
gagcaattggctggatggctatgtgatgtgctggatggactgggtgccgggaatgaggaa
ttaacggcgatacgcgatcgcgttcgtgagcaagtggtagcactgtgccgccgctatcct
gtgtatcaataa
DBGET
integrated database retrieval system
